Variant Details

Variant: esv3593411

Internal ID

6980735

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr2:174642605..174643669	hg38	UCSC Ensembl
Inner	chr2:174642606..174643668	hg38	UCSC Ensembl
Outer	chr2:174642604..174643670	hg38	UCSC Ensembl
	chr2:175507333..175508397	hg19	UCSC Ensembl
Inner	chr2:175507334..175508396	hg19	UCSC Ensembl
Outer	chr2:175507332..175508398	hg19	UCSC Ensembl

Cytoband

2q31.1

Allele length

Assembly	Allele length
hg38	1065
hg19	1065

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv10763725, essv10763894, essv10763758, essv10763628, essv10763847, essv10763674, essv10763828, essv10763898, essv10763829, essv10763726, essv10763759, essv10763881, essv10763855, essv10763742, essv10763746, essv10763798, essv10763665, essv10763701, essv10763719, essv10763663, essv10763802, essv10763840, essv10763778, essv10763839, essv10763838, essv10763678, essv10763816, essv10763734, essv10763776, essv10763659, essv10763866, essv10763764, essv10763815, essv10763784, essv10763643, essv10763779, essv10763888, essv10763772, essv10763744, essv10763727, essv10763879, essv10763651, essv10763796, essv10763824, essv10763644, essv10763753, essv10763851, essv10763771, essv10763896, essv10763713, essv10763812, essv10763794, essv10763768, essv10763681, essv10763800, essv10763862, essv10763834, essv10763631, essv10763884, essv10763755, essv10763880, essv10763827, essv10763869, essv10763687, essv10763760, essv10763833, essv10763675, essv10763658, essv10763666, essv10763723, essv10763780, essv10763848, essv10763650, essv10763745, essv10763721, essv10763645, essv10763841, essv10763859, essv10763693, essv10763858, essv10763835, essv10763669, essv10763852, essv10763718, essv10763875, essv10763677, essv10763817, essv10763652, essv10763629, essv10763647, essv10763733, essv10763700, essv10763809, essv10763711, essv10763813, essv10763653, essv10763788, essv10763655, essv10763775, essv10763902, essv10763657, essv10763671, essv10763886, essv10763831, essv10763716, essv10763703, essv10763877, essv10763849, essv10763811, essv10763761, essv10763637, essv10763695, essv10763895, essv10763696, essv10763825, essv10763676, essv10763698, essv10763664, essv10763762, essv10763717, essv10763836, essv10763748, essv10763863, essv10763662, essv10763646, essv10763830, essv10763769, essv10763860, essv10763649, essv10763638, essv10763729, essv10763765, essv10763660, essv10763722, essv10763635, essv10763790, essv10763633, essv10763686, essv10763791, essv10763735, essv10763627, essv10763856, essv10763786, essv10763807, essv10763773, essv10763874, essv10763797, essv10763783, essv10763757, essv10763857, essv10763870, essv10763889, essv10763837, essv10763680, essv10763861, essv10763749, essv10763707, essv10763901, essv10763731, essv10763694, essv10763893, essv10763897, essv10763706, essv10763876, essv10763900, essv10763846, essv10763826, essv10763785, essv10763777, essv10763682, essv10763709, essv10763782, essv10763656, essv10763683, essv10763799, essv10763853, essv10763741, essv10763636, essv10763752, essv10763810, essv10763821, essv10763867, essv10763805, essv10763756, essv10763668, essv10763845, essv10763679, essv10763792, essv10763630, essv10763808, essv10763667, essv10763781, essv10763710, essv10763789, essv10763738, essv10763747, essv10763730, essv10763708, essv10763661, essv10763689, essv10763724, essv10763832, essv10763737, essv10763712, essv10763882, essv10763806, essv10763774, essv10763684, essv10763670, essv10763634, essv10763648, essv10763699, essv10763793, essv10763715, essv10763704, essv10763740, essv10763728, essv10763691, essv10763763, essv10763804, essv10763873, essv10763720, essv10763714, essv10763899, essv10763641, essv10763850, essv10763654, essv10763625, essv10763640, essv10763751, essv10763705, essv10763883, essv10763864, essv10763754, essv10763872, essv10763891, essv10763692, essv10763688, essv10763767, essv10763801, essv10763865, essv10763822, essv10763878, essv10763868, essv10763766, essv10763739, essv10763814, essv10763871, essv10763818, essv10763639, essv10763770, essv10763685, essv10763787, essv10763626, essv10763903, essv10763702, essv10763732, essv10763750, essv10763697, essv10763819, essv10763736, essv10763820, essv10763803, essv10763672, essv10763844, essv10763892, essv10763795, essv10763887, essv10763690, essv10763673, essv10763854, essv10763642, essv10763890, essv10763885, essv10763842, essv10763823, essv10763843, essv10763743, essv10763632

Samples

NA19394, HG01986, NA19701, HG02944, HG01173, HG02496, HG03484, HG03121, HG03378, HG01885, HG03175, HG03111, NA19378, HG03517, HG03300, HG03449, HG02804, HG02323, HG03298, NA20294, HG03455, NA18878, NA18504, HG03295, HG03126, HG03515, HG01051, NA19920, HG03069, HG03478, NA19171, NA18519, HG03385, NA20320, NA19307, NA18923, HG02756, NA18916, NA19457, HG03224, NA20291, HG02143, NA18868, HG03045, NA19207, HG02642, NA19036, NA19239, HG01121, NA19921, HG02879, HG02943, HG02442, HG02820, HG01171, NA19403, HG01095, HG01882, HG01879, NA19043, NA20314, HG02144, HG02014, HG02878, HG01889, NA18907, NA19461, HG02429, HG02309, HG02881, HG01101, NA19099, HG03451, HG02256, HG01956, HG01107, HG02675, NA19017, NA19375, NA19309, HG02667, NA19256, NA19712, HG02010, HG02546, HG02308, HG03117, NA19331, NA18865, HG03259, HG02982, HG02941, NA19324, HG03473, HG02464, NA20281, NA19783, HG02558, HG03103, NA19328, NA18501, HG02971, HG03112, HG02095, HG01912, HG03977, HG03313, HG03063, HG03060, NA20289, NA18873, NA19116, NA19711, HG03077, HG03470, NA19900, NA19030, NA19430, HG02855, NA19316, HG02643, HG03303, HG03439, HG03514, HG02614, HG03559, NA19141, HG02610, NA18924, NA20877, NA19466, HG03548, HG03163, NA19332, NA20274, HG02337, HG02318, NA18881, NA19020, NA18877, HG03130, NA20321, HG03280, NA19819, HG03190, NA19393, HG03518, HG03297, NA20346, HG03172, NA19190, NA18870, NA19314, HG02895, HG03095, HG03074, NA19374, HG03464, NA19201, HG02811, HG03099, NA18489, HG03499, NA19448, HG02325, NA19119, NA19916, NA19131, HG03246, NA19138, NA18498, HG03479, NA19038, NA19404, HG01134, HG03460, NA19383, HG03556, HG03189, HG02315, HG03268, HG02573, NA19137, HG03195, NA19385, NA19471, HG02471, NA19159, HG02502, NA19189, HG03225, HG02946, NA18864, HG03058, NA19456, HG03055, HG03583, NA18908, HG02882, NA19200, HG03270, HG03169, HG02819, HG02977, HG02439, NA19247, HG03054, HG03160, HG02334, NA19347, NA19152, HG02511, HG02322, NA19982, HG02450, HG01989, HG02470, HG02976, HG03124, HG03294, HG02555, HG03311, NA19114, NA19118, NA19449, HG03202, NA18499, HG03397, NA19031, HG01241, NA19113, HG02884, NA19320, NA19338, HG01890, HG03354, NA19095, HG02586, NA19035, NA20296, HG02255, HG02455, HG03028, HG02282, NA18909, HG03240, NA19108, HG02799, HG02501, HG02983, HG01894, NA19435, NA19037, HG01958, HG02923, HG02837, NA19380, NA19439, HG03557, HG03108, HG03565, NA20348, NA19438, HG02970, NA19713, HG01085, HG02676, NA19096, HG02051, HG03162, NA19146, NA18488, HG01082, HG03072, HG02284, NA18522, HG02629, HG03118, HG03129

Known Genes

WIPF1

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3593411

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	279
Observed Complex	0
Frequency	n/a