Variant Details

Variant: esv3592437

Internal ID

6979764

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr2:130031239..130047818	hg38	UCSC Ensembl
Inner	chr2:130031281..130047777	hg38	UCSC Ensembl
Outer	chr2:130031198..130047860	hg38	UCSC Ensembl
	chr2:130788812..130805391	hg19	UCSC Ensembl
Inner	chr2:130788854..130805350	hg19	UCSC Ensembl
Outer	chr2:130788771..130805433	hg19	UCSC Ensembl

Cytoband

2q21.1

Allele length

Assembly	Allele length
hg38	16580
hg19	16580

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv10670169, essv10670158, essv10670188, essv10670152, essv10670187, essv10670142, essv10670157, essv10670183, essv10670124, essv10670154, essv10670173, essv10670190, essv10670165, essv10670138, essv10670117, essv10670133, essv10670132, essv10670166, essv10670135, essv10670180, essv10670170, essv10670172, essv10670156, essv10670122, essv10670171, essv10670176, essv10670163, essv10670123, essv10670168, essv10670155, essv10670151, essv10670137, essv10670194, essv10670174, essv10670109, essv10670181, essv10670148, essv10670162, essv10670192, essv10670149, essv10670134, essv10670143, essv10670112, essv10670131, essv10670127, essv10670159, essv10670118, essv10670147, essv10670130, essv10670145, essv10670141, essv10670193, essv10670184, essv10670161, essv10670128, essv10670177, essv10670160, essv10670125, essv10670113, essv10670114, essv10670144, essv10670121, essv10670189, essv10670115, essv10670116, essv10670120, essv10670140, essv10670146, essv10670153, essv10670139, essv10670185, essv10670196, essv10670108, essv10670178, essv10670164, essv10670129, essv10670179, essv10670191, essv10670119, essv10670182, essv10670195, essv10670110, essv10670186, essv10670175, essv10670167, essv10670111, essv10670126, essv10670150, essv10670136

Samples

HG01986, HG03559, HG03548, NA18881, HG03115, NA19350, HG03280, NA20294, NA19393, HG03518, HG01704, NA20356, NA20359, HG03572, NA19379, HG03135, NA19307, HG02541, NA19649, NA19197, HG03246, HG03578, NA19457, NA20287, HG02816, HG02922, HG01242, NA19038, HG02562, HG02461, HG03195, HG02571, HG03380, NA18864, NA20127, NA18908, HG02715, HG02477, NA19451, NA19027, HG02977, HG02570, NA19437, HG03132, HG01171, NA19707, HG01247, HG02334, NA19327, NA20126, HG03027, HG03294, HG03085, HG02884, NA18853, HG02666, HG03354, HG02772, HG03064, HG02813, HG02613, HG03240, HG02923, HG02611, HG02314, NA20362, NA19310, HG02839, HG03473, HG02317, HG02558, HG02970, NA19223, HG03049, HG02938, HG03258, NA18873, HG03410, NA19116, HG03470, HG02052, HG02861, NA18488, NA19316, NA19312, HG03072, NA18522, HG02629, HG03271

Known Genes

FAR2P1

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3592437

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	89
Observed Complex	0
Frequency	n/a