Variant Details

Variant: esv3590827

Internal ID

6978155

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr2:53616664..53619497	hg38	UCSC Ensembl
Inner	chr2:53616666..53619495	hg38	UCSC Ensembl
Outer	chr2:53616662..53619499	hg38	UCSC Ensembl
	chr2:53843801..53846634	hg19	UCSC Ensembl
Inner	chr2:53843803..53846632	hg19	UCSC Ensembl
Outer	chr2:53843799..53846636	hg19	UCSC Ensembl

Cytoband

2p16.2

Allele length

Assembly	Allele length
hg38	2834
hg19	2834

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv10507907, essv10507941, essv10507935, essv10507897, essv10507967, essv10507888, essv10507908, essv10507931, essv10507919, essv10507973, essv10507944, essv10507971, essv10507914, essv10507960, essv10507945, essv10507930, essv10507905, essv10507932, essv10507963, essv10507925, essv10507889, essv10507954, essv10507915, essv10507953, essv10507899, essv10507928, essv10507890, essv10507894, essv10507901, essv10507929, essv10507917, essv10507942, essv10507891, essv10507947, essv10507918, essv10507921, essv10507912, essv10507975, essv10507966, essv10507950, essv10507959, essv10507961, essv10507909, essv10507895, essv10507896, essv10507898, essv10507968, essv10507936, essv10507923, essv10507892, essv10507974, essv10507946, essv10507976, essv10507911, essv10507949, essv10507934, essv10507933, essv10507955, essv10507965, essv10507943, essv10507913, essv10507922, essv10507916, essv10507970, essv10507900, essv10507958, essv10507927, essv10507964, essv10507938, essv10507940, essv10507926, essv10507962, essv10507948, essv10507969, essv10507902, essv10507924, essv10507903, essv10507957, essv10507893, essv10507906, essv10507952, essv10507910, essv10507920, essv10507956, essv10507951, essv10507904, essv10507972, essv10507939, essv10507937

Samples

HG03559, HG02890, HG02610, HG03484, HG02628, HG02583, NA18508, HG02702, HG03111, HG02852, HG02836, HG02891, HG02012, HG03280, HG02624, HG03515, HG03139, HG02888, NA20356, HG03478, NA19374, HG03464, NA19201, HG02811, HG03091, HG03485, HG02756, HG02860, NA18916, NA20291, HG02922, NA19404, HG02703, NA19719, NA19137, NA19235, NA19172, HG02502, NA19209, HG03270, HG02570, NA19247, HG03160, NA18934, NA19347, NA19984, HG02322, HG02887, HG01077, HG02757, HG03294, HG03382, NA18499, HG03388, HG03024, HG02666, HG01890, HG02896, HG02594, HG03109, HG02813, NA19308, NA19149, HG02799, HG03539, NA19454, HG02923, HG03259, HG03433, NA19324, HG03473, HG02771, HG02971, NA19785, NA19351, HG03025, HG03049, HG03279, HG03063, HG02462, NA19030, HG03162, HG02947, NA18511, HG02629, HG02643, HG02006, HG03265, HG02760

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3590827

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	89
Observed Complex	0
Frequency	n/a