Variant Details

Variant: esv3589814

Internal ID

6977144

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr2:11254960..11260542	hg38	UCSC Ensembl
Inner	chr2:11255460..11260042	hg38	UCSC Ensembl
Outer	chr2:11253960..11261542	hg38	UCSC Ensembl
	chr2:11395086..11400668	hg19	UCSC Ensembl
Inner	chr2:11395586..11400168	hg19	UCSC Ensembl
Outer	chr2:11394086..11401668	hg19	UCSC Ensembl

Cytoband

2p25.1

Allele length

Assembly	Allele length
hg38	5583
hg19	5583

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv10408380, essv10408418, essv10408463, essv10408436, essv10408379, essv10408452, essv10408394, essv10408417, essv10408461, essv10408423, essv10408400, essv10408428, essv10408420, essv10408385, essv10408454, essv10408386, essv10408391, essv10408451, essv10408402, essv10408390, essv10408432, essv10408453, essv10408439, essv10408387, essv10408407, essv10408413, essv10408455, essv10408414, essv10408434, essv10408401, essv10408427, essv10408437, essv10408406, essv10408448, essv10408412, essv10408410, essv10408411, essv10408392, essv10408443, essv10408466, essv10408441, essv10408440, essv10408449, essv10408433, essv10408425, essv10408447, essv10408435, essv10408457, essv10408384, essv10408442, essv10408445, essv10408465, essv10408419, essv10408409, essv10408458, essv10408405, essv10408404, essv10408415, essv10408431, essv10408430, essv10408395, essv10408459, essv10408462, essv10408403, essv10408416, essv10408446, essv10408389, essv10408396, essv10408426, essv10408381, essv10408450, essv10408424, essv10408382, essv10408398, essv10408397, essv10408388, essv10408378, essv10408429, essv10408444, essv10408438, essv10408421, essv10408393, essv10408399, essv10408460, essv10408383, essv10408422, essv10408464, essv10408408, essv10408456

Samples

HG02614, HG02339, HG02890, HG03247, HG03057, HG03449, HG02798, NA20321, HG02870, HG02804, HG02769, NA19379, HG02811, NA19315, HG03091, NA18923, HG02595, HG02756, NA19038, HG02281, NA19404, NA19041, HG02573, HG01495, NA19024, NA20412, NA20342, HG03058, HG02623, NA19445, HG03055, NA19921, HG02879, HG02479, HG01435, HG03547, HG03291, HG03575, HG03085, HG01311, HG02429, NA19449, HG03136, HG03476, HG02445, HG03397, HG03078, NA19031, HG02309, HG03571, HG03391, NA19257, HG01286, HG02635, HG01988, HG02675, NA19401, HG02330, HG03539, HG02546, HG02721, HG01551, HG03469, HG03127, HG02464, NA19360, HG03557, NA19475, NA19376, HG02974, HG01912, HG03066, HG03279, HG02013, HG03077, HG03470, HG03401, HG02051, NA19121, HG03445, HG02763, NA18505, NA19129, HG02465, NA20763, HG02805, HG01509, NA19346, HG02760

Known Genes

ROCK2

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3589814

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	89
Observed Complex	0
Frequency	n/a