Variant Details

Variant: esv3589108

Internal ID

6976525

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr1:231184125..231186232	hg38	UCSC Ensembl
Inner	chr1:231184131..231186227	hg38	UCSC Ensembl
Outer	chr1:231184120..231186238	hg38	UCSC Ensembl
	chr1:231319871..231321978	hg19	UCSC Ensembl
Inner	chr1:231319877..231321973	hg19	UCSC Ensembl
Outer	chr1:231319866..231321984	hg19	UCSC Ensembl

Cytoband

1q42.2

Allele length

Assembly	Allele length
hg38	2108
hg19	2108

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv10318851, essv10318857, essv10318787, essv10318812, essv10318814, essv10318801, essv10318792, essv10318821, essv10318789, essv10318854, essv10318848, essv10318831, essv10318835, essv10318819, essv10318832, essv10318798, essv10318849, essv10318788, essv10318820, essv10318823, essv10318795, essv10318833, essv10318807, essv10318816, essv10318829, essv10318822, essv10318794, essv10318818, essv10318846, essv10318836, essv10318809, essv10318839, essv10318827, essv10318843, essv10318796, essv10318803, essv10318840, essv10318825, essv10318806, essv10318800, essv10318845, essv10318804, essv10318855, essv10318805, essv10318791, essv10318802, essv10318830, essv10318853, essv10318828, essv10318852, essv10318813, essv10318808, essv10318834, essv10318838, essv10318856, essv10318842, essv10318826, essv10318799, essv10318790, essv10318786, essv10318817, essv10318793, essv10318824, essv10318844, essv10318841, essv10318810, essv10318847, essv10318837, essv10318797, essv10318811, essv10318850, essv10318815

Samples

HG02890, HG03052, NA18508, HG02973, HG03175, HG03111, HG02836, NA18877, HG03115, HG03521, NA20298, NA18870, HG03069, HG03082, HG01250, NA20320, HG02485, NA18923, NA19198, NA19916, NA19131, HG02645, NA19197, HG03105, HG02054, NA19138, HG02981, HG02505, NA19383, HG02420, NA19901, HG02427, HG03267, NA20342, NA19445, HG03394, HG03114, HG03048, HG03291, NA18915, HG02953, HG02537, HG03124, NA18907, HG03311, HG01390, HG03123, NA18879, HG03476, NA18853, HG02666, NA19160, NA18858, HG01990, HG01915, HG02941, HG03304, HG03108, NA19328, HG03565, HG02970, HG01912, HG02646, HG02676, HG03470, HG01883, HG01251, HG03445, HG03162, HG02947, HG02805, HG01886

Known Genes

LOC149373, TRIM67

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3589108

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	72
Observed Complex	0
Frequency	n/a