Variant Details

Variant: esv3588060

Internal ID

6975484

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr1:179837274..179838676	hg38	UCSC Ensembl
Inner	chr1:179837275..179838676	hg38	UCSC Ensembl
Outer	chr1:179837274..179838677	hg38	UCSC Ensembl
	chr1:179806409..179807811	hg19	UCSC Ensembl
Inner	chr1:179806410..179807811	hg19	UCSC Ensembl
Outer	chr1:179806409..179807812	hg19	UCSC Ensembl

Cytoband

1q25.2

Allele length

Assembly	Allele length
hg38	1403
hg19	1403

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv10200124, essv10200100, essv10200077, essv10200098, essv10200084, essv10200125, essv10200136, essv10200116, essv10200129, essv10200086, essv10200073, essv10200123, essv10200118, essv10200092, essv10200121, essv10200104, essv10200085, essv10200134, essv10200081, essv10200076, essv10200105, essv10200069, essv10200106, essv10200080, essv10200115, essv10200091, essv10200114, essv10200137, essv10200117, essv10200107, essv10200108, essv10200094, essv10200132, essv10200078, essv10200079, essv10200119, essv10200110, essv10200075, essv10200095, essv10200122, essv10200096, essv10200087, essv10200113, essv10200133, essv10200090, essv10200103, essv10200068, essv10200111, essv10200083, essv10200101, essv10200138, essv10200131, essv10200093, essv10200120, essv10200126, essv10200089, essv10200139, essv10200130, essv10200088, essv10200070, essv10200112, essv10200099, essv10200127, essv10200071, essv10200097, essv10200128, essv10200082, essv10200135, essv10200109, essv10200074, essv10200072, essv10200102

Samples

HG03228, NA12286, HG01438, NA11995, HG04229, NA21092, HG00306, HG02600, NA19777, HG00150, HG01632, HG02688, HG04001, NA12155, NA12413, NA12341, HG01779, HG01488, HG00173, NA20756, HG01710, HG03762, HG01069, HG02490, HG01757, HG04106, HG03777, NA21107, HG01259, HG00338, NA20753, HG02737, HG01784, HG03908, HG00145, NA12342, HG04062, HG00190, NA20521, HG04107, HG01088, HG01498, NA20767, NA20876, NA20525, HG03858, NA20881, HG00140, NA19752, NA06985, HG03774, HG00240, HG00126, HG00366, HG02682, HG00357, HG04003, NA19818, HG01606, HG02694, HG00381, HG01783, HG00174, HG04098, HG02681, HG00274, NA11892, HG01082, NA12154, NA20908, HG01786, HG00553

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3588060

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	72
Observed Complex	0
Frequency	n/a