Variant Details

Variant: esv3587648

Internal ID

6627949

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr1:157203084..157206248	hg38	UCSC Ensembl
Inner	chr1:157203084..157206248	hg38	UCSC Ensembl
Outer	chr1:157202584..157206748	hg38	UCSC Ensembl
	chr1:157172874..157176038	hg19	UCSC Ensembl
Inner	chr1:157172874..157176038	hg19	UCSC Ensembl
Outer	chr1:157172374..157176538	hg19	UCSC Ensembl

Cytoband

1q23.1

Allele length

Assembly	Allele length
hg38	3165
hg19	3165

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv10153657, essv10153637, essv10153694, essv10153686, essv10153723, essv10153644, essv10153713, essv10153674, essv10153643, essv10153692, essv10153655, essv10153667, essv10153702, essv10153638, essv10153665, essv10153718, essv10153733, essv10153707, essv10153671, essv10153732, essv10153650, essv10153642, essv10153711, essv10153696, essv10153745, essv10153715, essv10153725, essv10153663, essv10153735, essv10153633, essv10153662, essv10153652, essv10153721, essv10153673, essv10153709, essv10153726, essv10153719, essv10153639, essv10153680, essv10153668, essv10153634, essv10153661, essv10153716, essv10153672, essv10153729, essv10153666, essv10153705, essv10153736, essv10153740, essv10153656, essv10153710, essv10153708, essv10153727, essv10153687, essv10153690, essv10153741, essv10153679, essv10153695, essv10153648, essv10153681, essv10153677, essv10153720, essv10153734, essv10153688, essv10153685, essv10153675, essv10153640, essv10153724, essv10153743, essv10153647, essv10153669, essv10153731, essv10153631, essv10153659, essv10153704, essv10153664, essv10153699, essv10153706, essv10153645, essv10153744, essv10153678, essv10153684, essv10153646, essv10153632, essv10153682, essv10153698, essv10153660, essv10153742, essv10153730, essv10153683, essv10153738, essv10153701, essv10153658, essv10153714, essv10153676, essv10153653, essv10153651, essv10153700, essv10153739, essv10153641, essv10153697, essv10153703, essv10153654, essv10153635, essv10153649, essv10153737, essv10153670, essv10153689, essv10153693, essv10153728, essv10153636, essv10153722, essv10153712, essv10153717, essv10153691

Samples

NA18745, HG00881, HG01850, HG00592, NA20529, HG03548, NA18647, NA19704, HG03300, HG03607, HG02852, HG00457, NA18999, HG03941, HG02870, HG02323, NA18545, HG02017, NA18962, NA20894, HG00717, HG04100, HG03873, NA18558, NA18547, HG02266, NA18618, HG03342, NA18582, HG03911, HG02111, NA20541, NA18611, HG01893, HG00632, HG03556, NA19731, NA18966, HG04020, HG02178, NA20412, HG02104, HG01967, NA19451, HG00464, NA18645, HG03780, NA20892, NA18613, NA18538, HG01435, NA19056, HG01871, HG00145, HG04146, HG01384, HG02513, HG02152, HG02236, NA21119, NA19462, HG03760, HG01979, HG02554, NA18939, HG02144, NA19081, NA20875, HG02497, HG02470, HG01948, NA21116, HG00844, HG02604, HG02259, HG02283, NA19752, HG02081, NA18963, HG01890, NA18593, HG02127, HG01956, HG03694, HG01992, NA18953, NA19309, NA18533, NA19834, HG03117, HG02304, NA20804, NA19331, NA20362, HG03012, NA18610, NA19376, HG03600, HG02971, HG01028, HG00342, NA19474, NA18994, HG03998, HG03615, HG01756, NA19011, NA18624, HG01566, HG01927, HG03439, HG01923, HG01578, HG00581, HG03271

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3587648

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	115
Observed Complex	0
Frequency	n/a