A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3587601



Internal ID6627902
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:154185111..154188897hg38UCSC Ensembl
Innerchr1:154185111..154188897hg38UCSC Ensembl
Outerchr1:154184848..154189254hg38UCSC Ensembl
chr1:154157587..154161373hg19UCSC Ensembl
Innerchr1:154157587..154161373hg19UCSC Ensembl
Outerchr1:154157324..154161730hg19UCSC Ensembl
Cytoband1q21.3
Allele length
AssemblyAllele length
hg383787
hg193787
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv10151906, essv10151896, essv10151928, essv10151905, essv10151910, essv10151978, essv10151920, essv10151922, essv10151940, essv10151980, essv10151950, essv10151911, essv10151933, essv10151937, essv10151902, essv10151977, essv10151942, essv10151935, essv10151918, essv10151986, essv10151903, essv10151967, essv10151945, essv10151965, essv10151913, essv10151955, essv10151936, essv10151938, essv10151931, essv10151990, essv10151963, essv10151908, essv10151953, essv10151914, essv10151958, essv10151952, essv10151894, essv10151981, essv10151907, essv10151901, essv10151969, essv10151983, essv10151948, essv10151975, essv10151897, essv10151951, essv10151957, essv10151925, essv10151895, essv10151959, essv10151954, essv10151987, essv10151962, essv10151892, essv10151923, essv10151961, essv10151916, essv10151926, essv10151930, essv10151972, essv10151976, essv10151947, essv10151988, essv10151899, essv10151919, essv10151985, essv10151946, essv10151973, essv10151982, essv10151991, essv10151960, essv10151939, essv10151891, essv10151949, essv10151968, essv10151970, essv10151941, essv10151924, essv10151932, essv10151956, essv10151979, essv10151917, essv10151964, essv10151966, essv10151971, essv10151929, essv10151909, essv10151921, essv10151934, essv10151927, essv10151943, essv10151893, essv10151915, essv10151912, essv10151974, essv10151989, essv10151944, essv10151898, essv10151904, essv10151984, essv10151900
SamplesNA20281, HG02317, NA19312, HG02477, HG02854, HG03120, HG03567, NA18520, NA18523, HG02284, HG03066, NA19149, HG03086, NA20299, HG03313, HG03189, NA18516, HG01956, NA19451, HG02887, HG02884, NA19184, NA19210, HG03548, HG02613, HG02323, NA18488, HG00737, HG03378, HG02433, HG02976, HG02583, HG02805, NA19143, HG02308, HG03088, HG03202, NA19197, HG02568, HG01124, HG02667, NA18876, NA19429, HG03027, HG02888, NA19380, HG03085, HG02325, HG02449, NA19372, HG03397, NA20348, NA19206, NA19027, HG02922, HG02804, NA18502, HG02501, NA19347, HG02545, NA19131, NA19159, HG02586, HG03118, NA19462, NA20355, HG02582, HG02624, HG02881, HG02570, HG02309, HG03108, HG03446, HG03303, HG01393, NA18907, NA19035, HG03499, HG02645, NA18915, HG03045, HG02953, HG01893, NA19099, HG03105, HG03240, HG02589, NA19327, HG02891, HG03025, HG03258, NA18499, HG01912, NA18924, NA19130, NA19171, NA19346, NA18853, NA19350, HG02620, NA19468
Known GenesTPM3
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3587601
Frequency
Sample Size2504
Observed Gain0
Observed Loss101
Observed Complex0
Frequencyn/a


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