Variant Details

Variant: esv3587526

Internal ID

6627828

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr1:151360740..151441151	hg38	UCSC Ensembl
	chr1:151333216..151413627	hg19	UCSC Ensembl

Cytoband

1q21.3

Allele length

Assembly	Allele length
hg38	80412
hg19	80412

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv10145393, essv10145351, essv10145341, essv10145392, essv10145407, essv10145279, essv10145428, essv10145359, essv10145316, essv10145374, essv10145333, essv10145482, essv10145395, essv10145377, essv10145352, essv10145399, essv10145375, essv10145432, essv10145426, essv10145330, essv10145369, essv10145294, essv10145421, essv10145337, essv10145285, essv10145390, essv10145371, essv10145469, essv10145449, essv10145386, essv10145429, essv10145451, essv10145306, essv10145412, essv10145289, essv10145326, essv10145424, essv10145299, essv10145275, essv10145323, essv10145418, essv10145363, essv10145340, essv10145308, essv10145485, essv10145414, essv10145302, essv10145413, essv10145378, essv10145477, essv10145404, essv10145459, essv10145367, essv10145420, essv10145397, essv10145336, essv10145405, essv10145290, essv10145417, essv10145313, essv10145444, essv10145436, essv10145272, essv10145343, essv10145441, essv10145440, essv10145296, essv10145373, essv10145403, essv10145309, essv10145276, essv10145286, essv10145358, essv10145329, essv10145430, essv10145383, essv10145319, essv10145295, essv10145345, essv10145396, essv10145448, essv10145300, essv10145287, essv10145368, essv10145335, essv10145311, essv10145304, essv10145434, essv10145320, essv10145273, essv10145334, essv10145284, essv10145438, essv10145422, essv10145380, essv10145347, essv10145458, essv10145450, essv10145398, essv10145354, essv10145465, essv10145479, essv10145297, essv10145456, essv10145312, essv10145464, essv10145381, essv10145271, essv10145372, essv10145332, essv10145457, essv10145364, essv10145277, essv10145439, essv10145460, essv10145416, essv10145344, essv10145331, essv10145389, essv10145467, essv10145278, essv10145425, essv10145274, essv10145435, essv10145408, essv10145325, essv10145472, essv10145385, essv10145355, essv10145454, essv10145356, essv10145324, essv10145288, essv10145318, essv10145305, essv10145350, essv10145292, essv10145446, essv10145442, essv10145401, essv10145298, essv10145361, essv10145360, essv10145346, essv10145478, essv10145473, essv10145388, essv10145387, essv10145487, essv10145394, essv10145310, essv10145427, essv10145471, essv10145357, essv10145445, essv10145402, essv10145303, essv10145353, essv10145362, essv10145317, essv10145315, essv10145301, essv10145463, essv10145376, essv10145314, essv10145281, essv10145443, essv10145466, essv10145370, essv10145339, essv10145384, essv10145484, essv10145328, essv10145431, essv10145406, essv10145455, essv10145291, essv10145382, essv10145379, essv10145293, essv10145480, essv10145409, essv10145474, essv10145447, essv10145437, essv10145411, essv10145461, essv10145468, essv10145481, essv10145307, essv10145282, essv10145348, essv10145280, essv10145453, essv10145283, essv10145483, essv10145476, essv10145410, essv10145322, essv10145400, essv10145419, essv10145365, essv10145433, essv10145342, essv10145486, essv10145462, essv10145475, essv10145338, essv10145327, essv10145470, essv10145415, essv10145423, essv10145321, essv10145452, essv10145391, essv10145366, essv10145349

Samples

HG04210, NA20874, HG03773, NA20339, HG01850, HG03857, HG04096, HG01918, HG02072, HG01303, HG03965, HG03731, HG01961, HG03960, HG03237, HG01855, HG04229, HG03687, HG03753, HG02648, HG02262, HG04202, HG03738, HG02122, HG04211, HG02150, HG03015, HG02275, HG01806, HG01305, HG03668, NA20805, HG03963, HG04018, HG03229, HG03018, HG01971, HG03667, HG03792, HG02734, HG03999, HG03679, HG03680, HG03478, HG03782, HG02792, HG03235, HG04100, HG01325, HG00356, HG03770, HG03016, HG02690, HG04022, HG03943, HG03757, HG03754, HG03490, HG04042, HG03873, HG02687, HG01968, HG03736, HG02549, HG03874, HG03663, HG02655, HG03234, HG03978, HG03479, HG02603, HG01242, HG01859, HG03868, HG01893, HG03897, HG02252, HG03986, HG03968, HG01170, HG02736, HG03691, HG03947, HG03777, HG01176, HG01973, HG04238, HG04020, HG03744, HG02073, HG02545, HG02780, HG03784, HG03862, HG02009, HG03844, HG03780, HG03697, HG03785, HG02439, HG03861, HG02793, HG01871, HG03718, HG02345, HG03644, HG03760, HG03786, HG01095, HG01088, HG02775, HG03491, HG02953, HG03771, HG03945, HG03775, HG04019, NA20519, HG02102, HG01323, HG01852, HG03781, HG02537, HG04235, HG02789, HG02555, HG03967, HG01777, HG01392, NA19461, HG03871, HG04054, HG03660, HG03858, HG02577, HG02787, HG01197, HG02121, HG03740, HG03643, HG04017, HG03953, HG04063, HG03971, HG03745, HG02783, HG02724, HG02601, HG02725, HG03672, HG03991, HG03774, HG04093, HG02127, HG03694, HG04200, HG03653, HG03720, HG03238, HG02455, HG04025, HG03866, HG03848, HG03790, HG04227, HG04026, HG02546, HG04239, HG03949, HG03838, HG02790, HG03695, NA19435, HG02304, HG01874, HG02651, HG01977, HG03869, HG03433, NA21095, HG01620, HG02685, HG03973, HG03681, HG03019, HG02558, HG03703, HG04080, HG04023, HG04015, HG03789, HG01917, HG03896, HG03977, HG03849, HG02699, HG02654, HG02079, HG01846, HG01089, HG03716, HG03684, HG04098, HG01872, HG03872, HG02681, HG02774, HG02052, HG03882, NA19312, HG02778, HG03890, HG03955, HG03686, HG01695, HG01061, HG03886

Known Genes

POGZ, PSMB4, SELENBP1

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3587526

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	217
Observed Complex	0
Frequency	n/a