Variant Details

Variant: esv3587213

Internal ID

6627520

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr1:112494070..112495334	hg38	UCSC Ensembl
Inner	chr1:112494073..112495332	hg38	UCSC Ensembl
Outer	chr1:112494068..112495337	hg38	UCSC Ensembl
	chr1:113036692..113037956	hg19	UCSC Ensembl
Inner	chr1:113036695..113037954	hg19	UCSC Ensembl
Outer	chr1:113036690..113037959	hg19	UCSC Ensembl

Cytoband

1p13.2

Allele length

Assembly	Allele length
hg38	1265
hg19	1265

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv10076469, essv10076527, essv10076458, essv10076488, essv10076545, essv10076549, essv10076540, essv10076546, essv10076515, essv10076503, essv10076482, essv10076548, essv10076521, essv10076462, essv10076547, essv10076517, essv10076516, essv10076494, essv10076495, essv10076514, essv10076464, essv10076484, essv10076492, essv10076486, essv10076460, essv10076474, essv10076506, essv10076465, essv10076493, essv10076502, essv10076510, essv10076544, essv10076507, essv10076480, essv10076468, essv10076497, essv10076496, essv10076533, essv10076530, essv10076541, essv10076508, essv10076476, essv10076543, essv10076538, essv10076550, essv10076501, essv10076542, essv10076512, essv10076490, essv10076463, essv10076472, essv10076522, essv10076471, essv10076491, essv10076520, essv10076531, essv10076479, essv10076537, essv10076473, essv10076519, essv10076477, essv10076513, essv10076535, essv10076467, essv10076459, essv10076523, essv10076499, essv10076509, essv10076461, essv10076529, essv10076487, essv10076551, essv10076526, essv10076470, essv10076500, essv10076539, essv10076536, essv10076466, essv10076528, essv10076532, essv10076525, essv10076483, essv10076524, essv10076505, essv10076534, essv10076518, essv10076475, essv10076504, essv10076481, essv10076498, essv10076485, essv10076489, essv10076478, essv10076511

Samples

NA19701, HG03366, HG02496, HG03484, HG03052, HG02973, HG03057, HG02318, HG03300, HG02419, HG02798, NA18486, NA18878, NA20332, NA19377, HG03139, HG03577, NA19314, NA20359, HG03074, HG03135, NA19448, HG02541, HG02840, HG02645, HG03105, HG03040, HG02816, HG02981, HG03268, NA19917, NA19137, HG02885, HG03195, NA19385, NA19172, HG03225, HG01198, HG03073, HG02715, NA18867, HG01312, HG02009, HG02442, NA19247, HG03088, HG02449, HG02253, HG02108, HG02953, NA20126, HG03027, HG02878, HG03123, HG03085, HG01161, NA20299, NA19655, HG02577, HG02445, NA18912, HG02884, NA19225, HG03354, HG02594, HG01988, HG02568, NA19436, HG03028, NA19440, HG02667, NA19256, NA19149, NA19712, HG01894, NA19380, NA20362, HG02941, NA19467, NA19360, HG03419, NA19759, NA19323, HG03112, HG01556, HG03313, HG03025, NA19468, HG02676, NA19030, HG03445, HG03162, HG02284, HG03271

Known Genes

WNT2B

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3587213

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	94
Observed Complex	0
Frequency	n/a