Variant Details

Variant: esv3586831

Internal ID

6627140

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr1:93747265..93748030	hg38	UCSC Ensembl
Inner	chr1:93747265..93748030	hg38	UCSC Ensembl
Outer	chr1:93747017..93748345	hg38	UCSC Ensembl
	chr1:94212821..94213586	hg19	UCSC Ensembl
Inner	chr1:94212821..94213586	hg19	UCSC Ensembl
Outer	chr1:94212573..94213901	hg19	UCSC Ensembl

Cytoband

1p22.1

Allele length

Assembly	Allele length
hg38	766
hg19	766

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv10022356, essv10022316, essv10022344, essv10022376, essv10022352, essv10022321, essv10022369, essv10022365, essv10022349, essv10022330, essv10022358, essv10022386, essv10022346, essv10022342, essv10022375, essv10022374, essv10022353, essv10022384, essv10022322, essv10022368, essv10022370, essv10022383, essv10022371, essv10022379, essv10022333, essv10022378, essv10022362, essv10022332, essv10022340, essv10022357, essv10022359, essv10022347, essv10022339, essv10022361, essv10022350, essv10022328, essv10022319, essv10022318, essv10022327, essv10022363, essv10022366, essv10022331, essv10022329, essv10022317, essv10022377, essv10022372, essv10022382, essv10022345, essv10022367, essv10022380, essv10022324, essv10022343, essv10022338, essv10022334, essv10022351, essv10022348, essv10022385, essv10022387, essv10022364, essv10022336, essv10022337, essv10022354, essv10022325, essv10022326, essv10022341, essv10022381, essv10022373, essv10022360, essv10022320, essv10022323, essv10022335, essv10022355

Samples

NA19146, HG02808, NA19913, HG03121, NA19030, NA19445, NA18933, HG02546, NA20516, HG03478, HG02284, HG03055, HG03304, HG03313, HG03189, HG03452, HG01956, HG03212, HG01883, HG02944, HG03111, HG03458, HG03099, HG01958, HG03548, NA19438, NA19143, HG03376, NA20412, NA19428, HG02981, HG02716, NA19443, HG02012, HG02143, NA19658, NA19324, NA19213, NA19172, NA19372, HG02768, HG03511, NA19119, HG03514, NA18858, HG02111, HG02511, HG03073, HG02536, HG03297, NA19318, HG03118, NA19462, HG03352, NA19235, HG02484, HG03303, NA20276, NA19116, HG03267, NA20298, HG03123, NA19452, HG01108, NA19346, HG01462, HG02555, HG02620, HG02505, NA19454, NA19468, NA19439

Known Genes

BCAR3

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3586831

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	72
Observed Complex	0
Frequency	n/a