Variant Details

Variant: esv3586190

Internal ID

6626503

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr1:59640577..59641432	hg38	UCSC Ensembl
Inner	chr1:59640578..59641431	hg38	UCSC Ensembl
Outer	chr1:59640576..59641433	hg38	UCSC Ensembl
	chr1:60106249..60107104	hg19	UCSC Ensembl
Inner	chr1:60106250..60107103	hg19	UCSC Ensembl
Outer	chr1:60106248..60107105	hg19	UCSC Ensembl

Cytoband

1p32.1

Allele length

Assembly	Allele length
hg38	856
hg19	856

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv9945380, essv9945284, essv9945338, essv9945359, essv9945390, essv9945376, essv9945400, essv9945303, essv9945311, essv9945312, essv9945403, essv9945347, essv9945353, essv9945241, essv9945351, essv9945232, essv9945339, essv9945356, essv9945235, essv9945301, essv9945247, essv9945306, essv9945287, essv9945355, essv9945358, essv9945305, essv9945398, essv9945382, essv9945399, essv9945384, essv9945296, essv9945385, essv9945410, essv9945274, essv9945333, essv9945369, essv9945357, essv9945375, essv9945240, essv9945261, essv9945377, essv9945316, essv9945291, essv9945283, essv9945383, essv9945328, essv9945253, essv9945250, essv9945244, essv9945290, essv9945256, essv9945289, essv9945381, essv9945298, essv9945370, essv9945343, essv9945309, essv9945321, essv9945277, essv9945332, essv9945288, essv9945374, essv9945260, essv9945345, essv9945270, essv9945395, essv9945273, essv9945272, essv9945401, essv9945251, essv9945362, essv9945292, essv9945266, essv9945372, essv9945386, essv9945271, essv9945329, essv9945367, essv9945320, essv9945387, essv9945267, essv9945319, essv9945275, essv9945364, essv9945391, essv9945268, essv9945323, essv9945396, essv9945392, essv9945408, essv9945365, essv9945264, essv9945393, essv9945308, essv9945313, essv9945248, essv9945300, essv9945331, essv9945371, essv9945389, essv9945363, essv9945324, essv9945327, essv9945233, essv9945236, essv9945258, essv9945373, essv9945379, essv9945360, essv9945361, essv9945336, essv9945352, essv9945269, essv9945239, essv9945255, essv9945307, essv9945237, essv9945350, essv9945314, essv9945252, essv9945293, essv9945412, essv9945397, essv9945326, essv9945342, essv9945368, essv9945245, essv9945242, essv9945405, essv9945249, essv9945295, essv9945276, essv9945294, essv9945330, essv9945278, essv9945262, essv9945279, essv9945349, essv9945286, essv9945282, essv9945334, essv9945409, essv9945246, essv9945340, essv9945304, essv9945310, essv9945315, essv9945281, essv9945366, essv9945257, essv9945325, essv9945388, essv9945354, essv9945238, essv9945341, essv9945243, essv9945346, essv9945411, essv9945318, essv9945322, essv9945299, essv9945337, essv9945348, essv9945394, essv9945402, essv9945404, essv9945335, essv9945263, essv9945265, essv9945254, essv9945317, essv9945285, essv9945378, essv9945407, essv9945234, essv9945302, essv9945297, essv9945280, essv9945259, essv9945344, essv9945406

Samples

HG02580, HG03135, HG03968, NA19248, NA19913, HG02107, HG02854, HG01359, HG02621, HG03064, HG01612, HG03479, NA19222, NA18523, HG03563, HG00112, HG03437, HG00245, HG02284, HG03410, HG03693, HG03129, HG03304, HG03086, HG04096, HG03247, NA20294, HG02450, NA20296, NA18516, HG03265, HG03469, HG02722, HG02733, NA19449, HG01491, HG00148, HG02010, HG02944, HG03048, HG01704, HG03432, HG03458, NA19210, NA21135, HG02471, HG03099, HG02231, HG03294, HG02660, HG00111, HG01344, HG02817, HG04001, HG00280, HG01101, NA19682, HG03485, HG03696, HG04020, HG03039, HG04140, NA20853, HG04106, HG03457, NA19037, HG01133, HG03803, HG02053, HG01148, NA19428, NA18912, HG04210, NA19239, HG03451, HG03202, HG01495, HG01272, NA20754, NA19096, HG02557, HG02667, HG03007, HG02763, HG01684, HG02851, HG03130, HG03100, HG01527, HG01879, HG04099, HG04063, HG02595, HG04185, NA19316, NA19190, NA19377, NA19153, HG01097, HG02442, HG02878, NA19172, HG04025, HG02054, HG03391, HG00268, HG03397, NA20767, HG01914, NA18510, NA18502, HG02439, HG02623, HG02807, NA19098, HG01281, HG02501, HG02558, HG03097, HG02938, HG01889, HG03096, NA20797, HG03433, HG01070, HG01447, NA19707, HG02052, NA19711, HG01531, HG02582, HG03385, HG01779, HG02309, HG03108, HG01697, HG03363, NA10851, HG01757, HG04033, NA18909, NA20357, NA20911, HG01405, NA19201, NA20827, NA19403, HG03866, HG02629, NA21109, HG02953, HG02628, NA20287, HG03815, HG02481, HG03476, HG02837, HG03074, HG00235, HG03259, HG02678, NA19655, NA20869, HG01058, HG01912, HG04177, HG02445, HG02642, HG02728, HG03372, HG03117, NA19350, HG02555, HG03517, HG03720, NA21091, HG01890, HG02860, NA19456, NA19121, HG04107

Known Genes

FGGY

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3586190

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	181
Observed Complex	0
Frequency	n/a