Variant Details

Variant: esv3586181

Internal ID

6626494

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr1:59380016..59380840	hg38	UCSC Ensembl
Inner	chr1:59380066..59380790	hg38	UCSC Ensembl
Outer	chr1:59379936..59380920	hg38	UCSC Ensembl
	chr1:59845688..59846512	hg19	UCSC Ensembl
Inner	chr1:59845738..59846462	hg19	UCSC Ensembl
Outer	chr1:59845608..59846592	hg19	UCSC Ensembl

Cytoband

1p32.1

Allele length

Assembly	Allele length
hg38	825
hg19	825

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv9942953, essv9942960, essv9942965, essv9943020, essv9943016, essv9942989, essv9943007, essv9942994, essv9943005, essv9943011, essv9942987, essv9942951, essv9943010, essv9942968, essv9943019, essv9942956, essv9943000, essv9942945, essv9942995, essv9942996, essv9942969, essv9942961, essv9942944, essv9942967, essv9942991, essv9943018, essv9943004, essv9943006, essv9943009, essv9942988, essv9942984, essv9942976, essv9943015, essv9942947, essv9943014, essv9942971, essv9943001, essv9943003, essv9942966, essv9942970, essv9943002, essv9943017, essv9942958, essv9942946, essv9942973, essv9942974, essv9942992, essv9942952, essv9942957, essv9942972, essv9943008, essv9942986, essv9942949, essv9942977, essv9942983, essv9942982, essv9942948, essv9942959, essv9942954, essv9943013, essv9942997, essv9942979, essv9942999, essv9942998, essv9942975, essv9942990, essv9942955, essv9942981, essv9942950, essv9942978, essv9942993, essv9942963, essv9942964, essv9942962, essv9943012, essv9942985, essv9942980

Samples

HG01443, HG03548, NA19914, HG02973, HG03449, HG02012, NA19350, NA19092, HG03297, HG02536, NA19443, NA20356, HG03478, NA19107, HG03095, NA19171, HG03436, HG02485, NA18498, NA19782, NA20291, HG02561, HG03212, NA20340, HG02885, NA19159, NA18520, NA19209, HG03583, HG03369, HG02879, HG02479, HG02009, HG03343, HG01136, NA18934, NA18933, HG01095, NA19043, HG02322, HG02450, HG02144, NA18910, NA18871, HG02555, HG03085, HG02429, HG03397, HG02881, HG01130, HG03451, HG03391, HG03354, HG02772, HG02255, HG02807, NA19834, NA19149, NA20276, NA18865, NA19439, HG02580, NA18501, HG02974, HG03025, HG02938, HG01781, HG03401, HG02051, HG03445, HG02947, NA19129, NA19312, HG02851, NA18522, HG02629, HG03118

Known Genes

FGGY

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3586181

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	77
Observed Complex	0
Frequency	n/a