Variant Details

Variant: esv3586084

Internal ID

6973604

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr1:54146201..54149534	hg38	UCSC Ensembl
Inner	chr1:54146211..54149525	hg38	UCSC Ensembl
Outer	chr1:54146192..54149544	hg38	UCSC Ensembl
	chr1:54611874..54615207	hg19	UCSC Ensembl
Inner	chr1:54611884..54615198	hg19	UCSC Ensembl
Outer	chr1:54611865..54615217	hg19	UCSC Ensembl

Cytoband

1p32.3

Allele length

Assembly	Allele length
hg38	3334
hg19	3334

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv9932383, essv9932388, essv9932355, essv9932381, essv9932365, essv9932395, essv9932362, essv9932370, essv9932351, essv9932396, essv9932382, essv9932359, essv9932386, essv9932367, essv9932371, essv9932394, essv9932375, essv9932391, essv9932389, essv9932397, essv9932393, essv9932390, essv9932372, essv9932376, essv9932374, essv9932387, essv9932385, essv9932358, essv9932356, essv9932380, essv9932361, essv9932354, essv9932364, essv9932377, essv9932379, essv9932366, essv9932353, essv9932378, essv9932368, essv9932392, essv9932352, essv9932363, essv9932360, essv9932357, essv9932369, essv9932373, essv9932384

Samples

HG03366, HG02628, HG02702, HG03247, HG02836, NA19020, HG03190, HG02589, HG02810, HG03091, NA19916, HG03370, HG02860, NA19904, HG02111, HG02281, HG03189, HG02573, NA19172, HG02471, NA18864, HG03267, HG03270, HG02439, NA19210, HG03547, HG03291, HG02511, NA19913, HG02322, NA18915, NA19452, NA19160, HG02586, NA19206, HG02667, HG01915, HG02611, HG01108, NA20281, HG03557, HG03103, NA19096, NA19116, NA19430, NA18511, HG03196

Known Genes

CDCP2

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3586084

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	47
Observed Complex	0
Frequency	n/a