Variant Details

Variant: esv3585829

Internal ID

6973349

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr1:41678420..41678744	hg38	UCSC Ensembl
Inner	chr1:41678420..41678744	hg38	UCSC Ensembl
Outer	chr1:41677940..41679127	hg38	UCSC Ensembl
	chr1:42144091..42144415	hg19	UCSC Ensembl
Inner	chr1:42144091..42144415	hg19	UCSC Ensembl
Outer	chr1:42143611..42144798	hg19	UCSC Ensembl

Cytoband

1p34.2

Allele length

Assembly	Allele length
hg38	325
hg19	325

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv9920081, essv9920072, essv9920074, essv9920098, essv9920070, essv9920093, essv9920092, essv9920087, essv9920075, essv9920073, essv9920095, essv9920102, essv9920103, essv9920067, essv9920077, essv9920097, essv9920069, essv9920068, essv9920071, essv9920076, essv9920106, essv9920061, essv9920078, essv9920088, essv9920063, essv9920079, essv9920096, essv9920083, essv9920086, essv9920082, essv9920084, essv9920080, essv9920060, essv9920104, essv9920064, essv9920099, essv9920085, essv9920094, essv9920089, essv9920091, essv9920101, essv9920066, essv9920105, essv9920062, essv9920065, essv9920100, essv9920090

Samples

NA19909, NA19399, HG03057, HG03449, HG02624, HG03193, HG03572, HG03074, HG03436, HG03485, HG03105, NA20291, NA19038, HG02143, HG03212, NA19036, HG03225, HG03583, NA20127, NA19200, HG02009, HG02977, HG03054, HG02450, HG01941, HG03027, HG02470, HG03202, NA18912, HG02585, HG02675, HG02813, HG03240, NA19108, HG02799, HG02759, NA20276, HG02721, HG03469, NA19143, NA19223, HG03077, HG01883, HG02861, NA18505, NA19755, HG03265

Known Genes

HIVEP3

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3585829

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	47
Observed Complex	0
Frequency	n/a