Variant Details

Variant: esv3585558

Internal ID

6625875

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr1:27244918..27245953	hg38	UCSC Ensembl
Inner	chr1:27244918..27245953	hg38	UCSC Ensembl
Outer	chr1:27244417..27246303	hg38	UCSC Ensembl
	chr1:27571409..27572444	hg19	UCSC Ensembl
Inner	chr1:27571409..27572444	hg19	UCSC Ensembl
Outer	chr1:27570908..27572794	hg19	UCSC Ensembl

Cytoband

1p36.11

Allele length

Assembly	Allele length
hg38	1036
hg19	1036

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv9894249, essv9894302, essv9894279, essv9894274, essv9894290, essv9894308, essv9894238, essv9894259, essv9894291, essv9894284, essv9894263, essv9894303, essv9894231, essv9894255, essv9894251, essv9894269, essv9894265, essv9894286, essv9894288, essv9894254, essv9894275, essv9894293, essv9894278, essv9894273, essv9894301, essv9894276, essv9894244, essv9894241, essv9894242, essv9894282, essv9894277, essv9894298, essv9894271, essv9894234, essv9894287, essv9894256, essv9894268, essv9894260, essv9894257, essv9894281, essv9894295, essv9894250, essv9894297, essv9894305, essv9894283, essv9894246, essv9894296, essv9894292, essv9894252, essv9894294, essv9894309, essv9894261, essv9894253, essv9894243, essv9894262, essv9894289, essv9894258, essv9894237, essv9894300, essv9894239, essv9894233, essv9894232, essv9894264, essv9894272, essv9894247, essv9894266, essv9894235, essv9894240, essv9894304, essv9894285, essv9894270, essv9894267, essv9894248, essv9894236, essv9894306, essv9894299, essv9894280, essv9894307, essv9894245, essv9894310

Samples

HG03514, HG01412, NA19397, HG02583, NA19204, NA18508, NA19332, NA19020, HG02891, NA19355, NA20346, HG03172, HG03372, HG02621, HG02595, HG03370, HG02860, NA18916, HG03479, HG03189, NA18874, NA19235, NA19207, HG02946, HG02427, HG01058, NA19025, NA18867, NA19451, NA19027, HG02442, HG01183, HG03120, HG02439, NA19247, HG03054, NA19437, NA19152, HG01879, HG02470, HG03311, HG03136, NA19042, HG03397, HG03388, NA19452, HG02585, NA19318, HG02332, NA19395, NA19035, NA19434, HG02546, NA19435, NA19037, HG02304, HG01272, HG02923, NA19380, NA18865, HG03127, HG01137, NA19143, NA19328, NA19438, NA19223, HG03025, NA19468, NA19093, HG03258, HG02462, NA19030, HG02947, NA19430, HG01886, HG02629, NA19429, NA19346, HG03166, HG01507

Known Genes

WDTC1

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3585558

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	80
Observed Complex	0
Frequency	n/a