Variant Details

Variant: esv3585331

Internal ID

6972855

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr1:16103291..16108720	hg38	UCSC Ensembl
Inner	chr1:16103291..16108720	hg38	UCSC Ensembl
Outer	chr1:16102816..16109054	hg38	UCSC Ensembl
	chr1:16429786..16435215	hg19	UCSC Ensembl
Inner	chr1:16429786..16435215	hg19	UCSC Ensembl
Outer	chr1:16429311..16435549	hg19	UCSC Ensembl

Cytoband

1p36.13

Allele length

Assembly	Allele length
hg38	5430
hg19	5430

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv9865031, essv9864923, essv9865036, essv9864932, essv9864967, essv9865033, essv9865007, essv9864983, essv9864940, essv9864927, essv9865017, essv9864986, essv9865000, essv9865029, essv9864933, essv9864935, essv9865038, essv9865028, essv9864957, essv9865015, essv9865040, essv9864955, essv9864972, essv9864999, essv9864961, essv9864948, essv9865043, essv9865041, essv9864946, essv9864980, essv9864994, essv9864960, essv9864942, essv9865005, essv9864920, essv9864984, essv9864922, essv9865025, essv9864925, essv9865026, essv9864934, essv9865004, essv9864936, essv9864924, essv9865018, essv9864985, essv9864976, essv9864966, essv9864952, essv9864977, essv9864969, essv9864959, essv9865009, essv9864930, essv9865046, essv9865002, essv9864951, essv9864978, essv9865027, essv9864944, essv9865030, essv9865021, essv9864964, essv9865001, essv9864981, essv9864962, essv9865023, essv9864990, essv9864950, essv9864974, essv9865013, essv9865045, essv9864958, essv9864975, essv9865003, essv9865042, essv9864997, essv9864989, essv9865039, essv9864947, essv9865010, essv9865011, essv9865024, essv9864939, essv9864931, essv9865019, essv9865035, essv9865008, essv9864979, essv9864987, essv9864965, essv9864971, essv9864945, essv9865032, essv9865020, essv9864926, essv9864996, essv9864956, essv9864929, essv9864992, essv9864995, essv9864963, essv9864949, essv9864937, essv9864921, essv9865044, essv9864928, essv9865037, essv9865012, essv9864993, essv9864954, essv9864982, essv9864970, essv9865016, essv9865014, essv9864988, essv9865022, essv9864953, essv9865006, essv9864968, essv9864943, essv9864973, essv9865034, essv9864998, essv9864991, essv9864941, essv9864938

Samples

NA19394, NA18502, HG02339, HG02610, HG03484, HG03121, NA19397, NA19909, HG03548, HG03163, HG02318, NA19350, HG03130, NA20321, HG02323, NA20294, HG03455, HG01456, NA20332, HG03126, HG03139, HG03172, HG02589, HG02536, NA19314, HG02769, HG03095, HG03074, HG03133, HG03086, NA19201, HG03706, HG02810, HG02952, NA20320, HG01167, HG02541, HG03370, NA19131, HG03342, HG03246, HG03105, HG03578, HG01083, HG03224, NA20287, HG02816, NA20291, HG02703, NA20278, HG03556, HG03045, NA19235, HG02642, HG02588, HG02420, NA19036, HG02571, HG02502, NA19189, NA20355, HG03267, HG02882, HG01550, HG03270, HG03048, HG02442, HG02570, NA19908, HG03363, HG03511, NA19403, HG02582, NA19462, NA19347, HG02678, NA19184, HG02449, HG01882, NA19455, HG02322, NA19982, HG03428, HG02307, HG02470, HG01390, HG03301, NA19461, NA19042, HG02881, NA19320, HG03571, HG03451, NA19095, HG02586, NA19375, NA19440, HG02807, NA19390, NA18909, HG03461, NA19147, NA18517, HG03437, HG02759, NA19434, HG02721, HG01958, HG02314, NA19143, HG03565, HG03432, HG03039, NA19248, HG03066, NA19351, HG02462, NA18873, HG03410, HG01105, HG01886, HG02808, HG03118, HG03129, NA19214, HG03166, NA19431

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3585331

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	127
Observed Complex	0
Frequency	n/a