Variant Details

Variant: esv3585266

Internal ID

6972791

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr1:13836597..13840507	hg38	UCSC Ensembl
Inner	chr1:13836598..13840506	hg38	UCSC Ensembl
Outer	chr1:13836596..13840508	hg38	UCSC Ensembl
	chr1:14163092..14167002	hg19	UCSC Ensembl
Inner	chr1:14163093..14167001	hg19	UCSC Ensembl
Outer	chr1:14163091..14167003	hg19	UCSC Ensembl

Cytoband

1p36.21

Allele length

Assembly	Allele length
hg38	3911
hg19	3911

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv9860443, essv9860406, essv9860368, essv9860357, essv9860506, essv9860437, essv9860412, essv9860358, essv9860381, essv9860371, essv9860430, essv9860453, essv9860365, essv9860450, essv9860434, essv9860455, essv9860354, essv9860391, essv9860462, essv9860447, essv9860388, essv9860378, essv9860425, essv9860404, essv9860467, essv9860373, essv9860490, essv9860493, essv9860473, essv9860483, essv9860424, essv9860422, essv9860451, essv9860403, essv9860494, essv9860400, essv9860374, essv9860419, essv9860449, essv9860356, essv9860466, essv9860401, essv9860423, essv9860421, essv9860487, essv9860446, essv9860420, essv9860383, essv9860485, essv9860399, essv9860465, essv9860496, essv9860458, essv9860416, essv9860360, essv9860489, essv9860361, essv9860503, essv9860463, essv9860407, essv9860481, essv9860457, essv9860441, essv9860396, essv9860500, essv9860386, essv9860417, essv9860488, essv9860438, essv9860397, essv9860445, essv9860456, essv9860352, essv9860387, essv9860384, essv9860353, essv9860498, essv9860398, essv9860504, essv9860482, essv9860372, essv9860477, essv9860415, essv9860442, essv9860491, essv9860468, essv9860390, essv9860362, essv9860472, essv9860408, essv9860507, essv9860402, essv9860385, essv9860436, essv9860370, essv9860364, essv9860474, essv9860351, essv9860363, essv9860413, essv9860505, essv9860478, essv9860480, essv9860418, essv9860366, essv9860382, essv9860460, essv9860444, essv9860431, essv9860426, essv9860359, essv9860452, essv9860495, essv9860479, essv9860501, essv9860355, essv9860469, essv9860414, essv9860448, essv9860508, essv9860476, essv9860475, essv9860376, essv9860435, essv9860379, essv9860377, essv9860389, essv9860367, essv9860497, essv9860350, essv9860471, essv9860410, essv9860502, essv9860492, essv9860380, essv9860433, essv9860470, essv9860392, essv9860409, essv9860429, essv9860440, essv9860484, essv9860349, essv9860486, essv9860461, essv9860459, essv9860411, essv9860454, essv9860375, essv9860499, essv9860394, essv9860405, essv9860395, essv9860393, essv9860464, essv9860432, essv9860427, essv9860369, essv9860439, essv9860428

Samples

HG03514, NA19394, HG02614, HG02574, HG01413, HG02496, NA19703, HG01610, HG03052, HG03175, NA19378, HG02433, HG02337, HG01188, NA18881, HG03300, HG03449, HG02852, HG02891, HG03130, NA19092, NA18486, HG02804, HG02323, HG03280, HG03518, HG03515, HG03297, HG03139, NA19443, HG02895, NA18510, NA19107, NA19374, HG03133, HG03464, NA19171, HG03436, HG03385, HG03168, HG03499, HG03091, HG02595, HG03485, HG02620, NA19916, NA19131, NA19023, HG03578, NA20287, HG03040, HG02111, NA19130, HG03079, HG02562, HG02143, NA19383, HG03556, HG02634, NA19137, HG02885, HG03195, NA19036, NA20412, HG02502, HG03225, HG02427, HG02545, NA19456, HG03583, HG03369, HG01524, HG02716, HG03343, HG02820, HG03054, NA19437, NA19403, NA19347, HG03291, HG02511, NA19391, HG02322, NA19982, HG02144, NA20126, NA18871, HG02968, HG02757, HG02555, NA18907, HG03311, HG03472, HG03301, NA19449, HG03136, HG02817, HG01197, HG03388, HG03078, HG03446, HG03024, NA19099, NA19257, HG03046, NA19452, NA19225, NA19318, NA19095, NA18858, HG02568, NA19035, NA19308, NA19440, NA19309, HG02667, NA19390, NA18909, NA19147, NA18517, HG03437, NA19712, NA19473, HG01894, HG01551, HG03458, HG03469, NA20281, HG03084, NA20357, NA18501, HG01912, HG03097, HG01028, HG03025, HG02646, HG02053, NA19093, HG03060, NA20289, HG03410, HG02013, HG02051, HG01914, HG01883, NA19121, HG03445, HG02947, NA18505, NA19146, NA19316, HG03376, NA18511, HG01886, HG02808, HG02629, HG03129, HG03439, NA19431, HG03265

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3585266

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	160
Observed Complex	0
Frequency	n/a