Variant Details

Variant: esv3585107

Internal ID

6972631

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr1:6398574..6399551	hg38	UCSC Ensembl
Inner	chr1:6398575..6399551	hg38	UCSC Ensembl
Outer	chr1:6398574..6399552	hg38	UCSC Ensembl
	chr1:6458634..6459611	hg19	UCSC Ensembl
Inner	chr1:6458635..6459611	hg19	UCSC Ensembl
Outer	chr1:6458634..6459612	hg19	UCSC Ensembl

Cytoband

1p36.31

Allele length

Assembly	Allele length
hg38	978
hg19	978

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv9845982, essv9845958, essv9845991, essv9845955, essv9846005, essv9845962, essv9846015, essv9845956, essv9845985, essv9845980, essv9845953, essv9845999, essv9845995, essv9845992, essv9845978, essv9845984, essv9846023, essv9846029, essv9846027, essv9845967, essv9845971, essv9845988, essv9845968, essv9846007, essv9845957, essv9846014, essv9846002, essv9845949, essv9846024, essv9846013, essv9846000, essv9846018, essv9846017, essv9845954, essv9845974, essv9846008, essv9846025, essv9846010, essv9845963, essv9845994, essv9846016, essv9845996, essv9845983, essv9845979, essv9845952, essv9845972, essv9845969, essv9846006, essv9846026, essv9845990, essv9845960, essv9845975, essv9846028, essv9845986, essv9846001, essv9845950, essv9845977, essv9845965, essv9845993, essv9845981, essv9846020, essv9845973, essv9846003, essv9845989, essv9845964, essv9845961, essv9846012, essv9846004, essv9845976, essv9846022, essv9846019, essv9846021, essv9845997, essv9845987, essv9845951, essv9846011, essv9845959, essv9845966, essv9845970, essv9845998, essv9846009

Samples

HG01986, HG03559, HG02944, HG02583, NA19664, NA19466, NA19332, HG03111, HG03517, HG03057, HG02419, HG03515, NA19107, HG03572, NA19319, NA18489, NA19131, NA18498, HG03479, NA19384, HG02981, HG02143, NA19137, HG03212, NA19024, HG03352, NA19036, HG02502, NA19239, HG03058, NA19200, HG03048, HG01312, HG00743, HG02879, NA19247, NA19210, HG02334, HG02582, HG02678, HG02449, HG02887, HG01989, HG02508, HG02757, NA19461, NA19449, HG02445, NA19042, NA19113, NA19320, NA18853, HG03046, NA18523, NA19095, HG01896, HG02557, NA18517, NA20276, NA19331, NA20362, NA19334, NA19428, HG02464, HG02317, NA19475, NA19818, NA19328, NA20348, NA19472, NA19351, HG02053, HG03258, HG03351, HG02768, HG03470, HG02052, NA18505, HG03198, HG02629, NA19214

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3585107

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	81
Observed Complex	0
Frequency	n/a