| Internal ID | 18770350 |
| Landmark | |
| Location Information | |
| Cytoband | 8p22 |
| Allele length | | Assembly | Allele length | | hg38 | 20237 | | hg19 | 20237 | | hg18 | 20237 |
|
| Variant Type | CNV loss |
| Copy Number | |
| Allele State | |
| Allele Origin | |
| Probe Count | |
| Validation Flag | |
| Merged Status | M |
| Merged Variants | |
| Supporting Variants | essv9838362, essv9838361, essv9838363, essv9838364 |
| Samples | KSF005, 1WS, OA072, OA016 |
| Known Genes | TUSC3 |
| Method | SNP array |
| Analysis | We applied stringent filtering criteria such that CNV had to be a minimum of 1 kb and span 5 consecutive probes, and be detected by at least 2 out of the 3 algorithms. In addition we excluded CNVs that were on the X and Y-chromosomes, or approximately 300 kb adjacent to the centromeres and telomeres. |
| Platform | Affymetrix Genome-Wide Human SNP Array 6.0 |
| Comments | |
| Reference | Mokhtar_et_al_2014 |
| Pubmed ID | 24956385 |
| Accession Number(s) | esv3584880
|
| Frequency | | Sample Size | 34 | | Observed Gain | 0 | | Observed Loss | 4 | | Observed Complex | 0 | | Frequency | n/a |
|
