A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3584562



Internal ID18770032
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr8:2037203..2267878hg38UCSC Ensembl
Innerchr8:1985345..2213652hg19UCSC Ensembl
Innerchr8:1972752..2201059hg18UCSC Ensembl
Cytoband8p23.2
Allele length
AssemblyAllele length
hg38230676
hg19228308
hg18228308
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv65e213
Supporting Variantsessv9837838
SamplesKSF008
Known GenesMIR7160, MYOM2
MethodSNP array
AnalysisWe applied stringent filtering criteria such that CNV had to be a minimum of 1 kb and span 5 consecutive probes, and be detected by at least 2 out of the 3 algorithms. In addition we excluded CNVs that were on the X and Y-chromosomes, or approximately 300 kb adjacent to the centromeres and telomeres.
PlatformAffymetrix Genome-Wide Human SNP Array 6.0
Comments
ReferenceMokhtar_et_al_2014
Pubmed ID24956385
Accession Number(s)esv3584562
Frequency
Sample Size34
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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