Variant Details

Variant: esv3338758

Internal ID

15185745

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr4:42086021..42086037	hg38	UCSC Ensembl
Inner	chr4:42086012..42086046	hg38	UCSC Ensembl
Outer	chr4:42085993..42086062	hg38	UCSC Ensembl
	chr4:42088038..42088054	hg19	UCSC Ensembl
Inner	chr4:42088029..42088063	hg19	UCSC Ensembl
Outer	chr4:42088010..42088079	hg19	UCSC Ensembl
	chr4:41782795..41782811	hg18	UCSC Ensembl
Inner	chr4:41782820..41782786	hg18	UCSC Ensembl
Outer	chr4:41782767..41782836	hg18	UCSC Ensembl

Cytoband

4p13

Allele length

Assembly	Allele length
hg38	289
hg19	289
hg18	289

Variant Type

CNV insertion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv8918301, essv8918292, essv8918297, essv8918240, essv8918304, essv8918310, essv8918330, essv8918250, essv8918285, essv8918253, essv8918306, essv8918261, essv8918277, essv8918325, essv8918263, essv8918268, essv8918255, essv8918242, essv8918283, essv8918287, essv8918254, essv8918288, essv8918286, essv8918276, essv8918312, essv8918271, essv8918256, essv8918248, essv8918314, essv8918321, essv8918266, essv8918243, essv8918315, essv8918320, essv8918294, essv8918245, essv8918318, essv8918295, essv8918298, essv8918281, essv8918278, essv8918329, essv8918328, essv8918275, essv8918332, essv8918331, essv8918284, essv8918264, essv8918309, essv8918282, essv8918319, essv8918334, essv8918279, essv8918296, essv8918300, essv8918327, essv8918299, essv8918241, essv8918262, essv8918259, essv8918323, essv8918260, essv8918246, essv8918270, essv8918317, essv8918308, essv8918239, essv8918257, essv8918316, essv8918307, essv8918274, essv8918326, essv8918252, essv8918290, essv8918272, essv8918265, essv8918311, essv8918293, essv8918305, essv8918251, essv8918322, essv8918244, essv8918303, essv8918267, essv8918333, essv8918249, essv8918273, essv8918289

Samples

NA12717, NA18947, NA11829, NA18861, NA18592, NA10851, NA18980, NA18561, NA11920, NA11931, NA18603, NA12045, NA12751, NA18545, NA12004, NA18959, NA18870, NA18526, NA12750, NA12155, NA07357, NA07346, NA18563, NA19005, NA18944, NA18940, NA18550, NA18558, NA18547, NA18960, NA18942, NA11992, NA07347, NA18582, NA18571, NA18964, NA18949, NA12761, NA12156, NA12044, NA11994, NA12828, NA18973, NA18638, NA11831, NA10847, NA18951, NA18605, NA12489, NA12003, NA18579, NA18572, NA18948, NA18537, NA18566, NA18573, NA11919, NA12249, NA18532, NA18555, NA12144, NA18570, NA18858, NA18593, NA18945, NA18576, NA12043, NA18608, NA18953, NA18542, NA12716, NA11881, NA18961, NA18952, NA18564, NA07051, NA18943, NA07037, NA06986, NA12749, NA18609, NA18552, NA07000, NA12154, NA18562, NA12776, NA18965, NA18577

Known Genes

SLC30A9

Method

Sequencing

Analysis

Platform

Illumina

Comments

Reference

1000_Genomes_Consortium_Pilot_Project

Pubmed ID

20981092

Accession Number(s)

esv3338758

Frequency

Sample Size	185
Observed Gain	88
Observed Loss	0
Observed Complex	0
Frequency	n/a