Variant Details

Variant: esv3303686

Internal ID

15150634

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr4:42086014..42086015	hg38	UCSC Ensembl
Inner	chr4:42085996..42086033	hg38	UCSC Ensembl
Outer	chr4:42085995..42086034	hg38	UCSC Ensembl
	chr4:42088031..42088032	hg19	UCSC Ensembl
Inner	chr4:42088013..42088050	hg19	UCSC Ensembl
Outer	chr4:42088012..42088051	hg19	UCSC Ensembl
	chr4:41782788..41782789	hg18	UCSC Ensembl
Inner	chr4:41782807..41782770	hg18	UCSC Ensembl
Outer	chr4:41782769..41782808	hg18	UCSC Ensembl

Cytoband

4p13

Allele length

Assembly	Allele length
hg38	303
hg19	303
hg18	303

Variant Type

CNV mobile element insertion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv7790516, essv7828677, essv7824100, essv7823721, essv7822077, essv7819239, essv7774852, essv7815622, essv7811719, essv7796429, essv7822525, essv7776679, essv7772700, essv7813248, essv7797124, essv7773606, essv7827309, essv7786851, essv7829387, essv7782432, essv7834891, essv7813542, essv7794865, essv7786911, essv7826959, essv7818668, essv7795879, essv7808746, essv7833878, essv7802035, essv7788003, essv7781064, essv7822599, essv7828960, essv7785631, essv7778205, essv7830119, essv7812799, essv7800417, essv7791136, essv7783501, essv7796643, essv7793398, essv7819696, essv7773277, essv7803301, essv7789254, essv7774441, essv7770972, essv7788500, essv7772973, essv7823504, essv7835380, essv7821124, essv7775638, essv7830464, essv7807730, essv7802929, essv7835849, essv7810396, essv7800515, essv7810732, essv7770349, essv7806647, essv7815186, essv7777074, essv7783078, essv7799107, essv7834277, essv7810040, essv7784949, essv7777433, essv7804996, essv7801105, essv7780666, essv7814764, essv7792497, essv7778992, essv7825667, essv7802643, essv7794273, essv7816895, essv7819964, essv7781912, essv7820341, essv7787943, essv7776239, essv7780086, essv7805228, essv7808083, essv7797508, essv7821447, essv7789877, essv7771967, essv7793891, essv7785694, essv7798158, essv7770797, essv7830941, essv7809183

Samples

NA12717, NA18947, NA11829, NA18861, NA18592, NA12814, NA10851, NA18980, NA18561, NA11920, NA11931, NA18603, NA12045, NA12751, NA18545, NA12004, NA18959, NA18870, NA18526, NA12750, NA12155, NA07357, NA07346, NA18563, NA19005, NA18944, NA18940, NA18550, NA12812, NA12891, NA18558, NA18547, NA18960, NA18942, NA11992, NA11918, NA07347, NA18582, NA18571, NA12287, NA18964, NA18949, NA12761, NA12156, NA12044, NA11994, NA12815, NA12828, NA18973, NA18638, NA11831, NA10847, NA18951, NA18605, NA12489, NA12003, NA12878, NA12872, NA18579, NA18572, NA18948, NA18537, NA18566, NA18573, NA11919, NA11894, NA11840, NA12249, NA12892, NA18532, NA18555, NA12144, NA18570, NA18858, NA18593, NA18945, NA18576, NA12043, NA18608, NA18953, NA18542, NA12716, NA11881, NA18961, NA18952, NA18564, NA12873, NA07051, NA18943, NA07037, NA06986, NA12749, NA18609, NA18552, NA07000, NA12154, NA18562, NA12776, NA18965, NA18577

Known Genes

SLC30A9

Method

Sequencing

Analysis

Platform

Roche 454

Comments

Reference

1000_Genomes_Consortium_Pilot_Project

Pubmed ID

20981092

Accession Number(s)

esv3303686

Frequency

Sample Size	185
Observed Gain	100
Observed Loss	0
Observed Complex	0
Frequency	n/a