A curated catalogue of human genomic structural variation




Variant Details

Variant: esv29980



Internal ID112894
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:1841827..2119119hg19UCSC Ensembl
Innerchr11:1798403..2075695hg18UCSC Ensembl
Cytoband11p15.5
Allele length
AssemblyAllele length
hg19n/a
hg18n/a
Variant TypeCNV Loss
Copy Number
Allele State
Allele OriginNot tested
Probe Count
Merged StatusS
Merged Variants
Supporting Variantsessv84219
SamplesHuRef
Known GenesH19, LSP1, MIR4298, MIR675, MRPL23, MRPL23-AS1, SYT8, TNNI2, TNNT3
Method
AnalysisA set of calls produced from all analyses.
PlatformIllumina HumanHap650Y Genotyping BeadChip + Agilent Custom High-Definition-CGH Microarray + [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array + [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array + Nimblegen human whole-genome 385K CGH array
Comments
ReferenceLevy et al 2007
Pubmed ID17803354
Accession Number(s)esv29980
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer