A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2764123



Internal ID10378159
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr8:40326278..40338120hg38UCSC Ensembl
Innerchr8:40183797..40195639hg19UCSC Ensembl
Innerchr8:40302954..40314796hg18UCSC Ensembl
Cytoband8p11.21
Allele length
AssemblyAllele length
hg3811843
hg1911843
hg1811843
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv156e203
Supporting Variantsessv6993122, essv6993115, essv6993092, essv6993098, essv6993070, essv6993129, essv6993077, essv6993102, essv6993076, essv6993127, essv6993066, essv6993073, essv6993111, essv6993081, essv6993109, essv6993133, essv6993080, essv6993100, essv6993099, essv6993065, essv6993094, essv6993124, essv6993117, essv6993114, essv6993074, essv6993121, essv6993139, essv6993072, essv6993071, essv6993104, essv6993131, essv6993126, essv6993088, essv6993085, essv6993069, essv6993097, essv6993083, essv6993130, essv6993120, essv6993091, essv6993119, essv6993107, essv6993135, essv6993105, essv6993110, essv6993096, essv6993118, essv6993132, essv6993089, essv6993068, essv6993137, essv6993136, essv6993108, essv6993082, essv6993116, essv6993103, essv6993125, essv6993106, essv6993075, essv6993128, essv6993095, essv6993093, essv6993113, essv6993084, essv6993087, essv6993086, essv6993138
SamplesSW_0831, SW_1222, SW_1400, SW_1108, SW_1170, SW_0575, SW_1042, SW_0164, SW_1150, SW_1425, SW_1324, SW_1287, SW_0762, SW_1195, SW_0086, SW_1397, SW_1294, SW_0020, SW_1261, SW_0815, SW_0604, SW_1258, SW_1126, SW_1263, SW_0185, SW_0048, SW_0648, SW_1190, SW_0216, SW_1028, SW_0073, SW_0803, SW_1276, SW_0757, SW_1508, SW_1371, SW_0859, SW_1411, SW_1120, SW_1162, SW_1103, SW_1438, SW_1265, SW_1205, SW_0118, SW_1112, SW_1510, SW_1004, SW_0031, SW_0678, SW_0651, SW_1248, SW_1142, SW_1463, SW_1180, SW_1217, SW_1137, SW_1279, SW_0842, SW_1229, SW_1046, SW_1073, SW_0148, SW_0169, SW_1281, SW_1203, SW_0239
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)esv2764123
Frequency
Sample Size1109
Observed Gain0
Observed Loss67
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer