A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2763560



Internal ID10376240
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:72611765..72656579hg38UCSC Ensembl
Innerchr1:73077448..73122262hg19UCSC Ensembl
Innerchr1:72850036..72894850hg18UCSC Ensembl
Cytoband1p31.1
Allele length
AssemblyAllele length
hg3844815
hg1944815
hg1844815
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv7032134
SamplesSW_1412
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)esv2763560
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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