A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2763471



Internal ID10376151
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr5:99307764..99417851hg38UCSC Ensembl
Innerchr5:98643468..98753555hg19UCSC Ensembl
Innerchr5:98671367..98781454hg18UCSC Ensembl
Cytoband5q21.1
Allele length
AssemblyAllele length
hg38110088
hg19110088
hg18110088
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv7031299
SamplesSW_1334
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)esv2763471
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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