A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2763162



Internal ID10030512
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr17:36460442..36567250hg38UCSC Ensembl
Innerchr17:34816256..34923089hg19UCSC Ensembl
Innerchr17:31890369..31997202hg18UCSC Ensembl
Cytoband17q12
Allele length
AssemblyAllele length
hg38106809
hg19106834
hg18106834
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv7024391
SamplesRW_0529
Known GenesGGNBP2, MYO19, PIGW, ZNHIT3
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)esv2763162
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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