A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2763148



Internal ID10375828
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:88265885..88288190hg38UCSC Ensembl
Innerchr16:88299491..88321796hg19UCSC Ensembl
Innerchr16:86856992..86879297hg18UCSC Ensembl
Cytoband16q24.2
Allele length
AssemblyAllele length
hg3822306
hg1922306
hg1822306
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv7024056
SamplesRW_0361
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)esv2763148
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer