A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2763105



Internal ID10375785
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:72683003..72686275hg38UCSC Ensembl
Innerchr15:72975344..72978616hg19UCSC Ensembl
Innerchr15:70762397..70765669hg18UCSC Ensembl
Cytoband15q24.1
Allele length
AssemblyAllele length
hg383273
hg193273
hg183273
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv7023358
SamplesRW_0207
Known GenesBBS4, HIGD2B
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)esv2763105
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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