A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2763041



Internal ID10375721
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr2:192511057..192596730hg38UCSC Ensembl
Innerchr2:193375783..193461456hg19UCSC Ensembl
Innerchr2:193084028..193169701hg18UCSC Ensembl
Cytoband2q32.3
Allele length
AssemblyAllele length
hg3885674
hg1985674
hg1885674
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv7021766
SamplesSW_1272
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)esv2763041
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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