A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2762983



Internal ID10377694
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr12:60341694..60373300hg38UCSC Ensembl
Innerchr12:60735475..60767081hg19UCSC Ensembl
Innerchr12:59021742..59053348hg18UCSC Ensembl
Cytoband12q14.1
Allele length
AssemblyAllele length
hg3831607
hg1931607
hg1831607
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv7020952
SamplesRW_0134
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)esv2762983
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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