A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2762606



Internal ID10375404
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:89241194..89250503hg38UCSC Ensembl
Innerchr6:89950913..89960222hg19UCSC Ensembl
Innerchr6:90007632..90016941hg18UCSC Ensembl
Cytoband6q15
Allele length
AssemblyAllele length
hg389310
hg199310
hg189310
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv7014015
SamplesRW_0272
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)esv2762606
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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