A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2761946



Internal ID10374744
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr17:11924350..11940059hg38UCSC Ensembl
Innerchr17:11827667..11843376hg19UCSC Ensembl
Innerchr17:11768392..11784101hg18UCSC Ensembl
Cytoband17p12
Allele length
AssemblyAllele length
hg3815710
hg1915710
hg1815710
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv7001519
SamplesSW_0862
Known GenesDNAH9
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)esv2761946
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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