A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2761882



Internal ID10374680
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:89032857..89053860hg38UCSC Ensembl
Innerchr15:89576088..89597091hg19UCSC Ensembl
Innerchr15:87377092..87398095hg18UCSC Ensembl
Cytoband15q26.1
Allele length
AssemblyAllele length
hg3821004
hg1921004
hg1821004
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv7000415
SamplesSW_0241
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)esv2761882
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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