A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2761620



Internal ID10028973
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:96287288..96329992hg38UCSC Ensembl
Innerchr10:98047045..98089749hg19UCSC Ensembl
Innerchr10:98037035..98079739hg18UCSC Ensembl
Cytoband10q24.1
Allele length
AssemblyAllele length
hg3842705
hg1942705
hg1842705
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6995205
SamplesSW_0582
Known GenesDNTT
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)esv2761620
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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