A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2761445



Internal ID10028802
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr8:86173241..86322968hg38UCSC Ensembl
Innerchr8:87185470..87335197hg19UCSC Ensembl
Innerchr8:87254586..87404313hg18UCSC Ensembl
Cytoband8q21.3
Allele length
AssemblyAllele length
hg38149728
hg19149728
hg18149728
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6993251
SamplesSW_0817
Known GenesSLC7A13
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)esv2761445
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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