A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2760395



Internal ID10376703
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:85812759..85822577hg38UCSC Ensembl
Innerchr15:86355990..86365808hg19UCSC Ensembl
Innerchr15:84156994..84166812hg18UCSC Ensembl
Cytoband15q25.3
Allele length
AssemblyAllele length
hg389819
hg199819
hg189819
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv7023508, essv7023509, essv7023507
SamplesRW_0600, RW_0662, RW_0107
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)esv2760395
Frequency
Sample Size1109
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


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