A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2760342



Internal ID10376650
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr14:42430871..42523285hg38UCSC Ensembl
Innerchr14:42900074..42992488hg19UCSC Ensembl
Innerchr14:41969824..42062238hg18UCSC Ensembl
Cytoband14q21.1
Allele length
AssemblyAllele length
hg3892415
hg1992415
hg1892415
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv7022150, essv7022149, essv7022148
SamplesRW_0169, RW_0643, RW_0108
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)esv2760342
Frequency
Sample Size1109
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


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