A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2760232



Internal ID10027595
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr12:31104761..31259735hg38UCSC Ensembl
Innerchr12:31257695..31412669hg19UCSC Ensembl
Innerchr12:31148962..31303936hg18UCSC Ensembl
Cytoband12p11.21
Allele length
AssemblyAllele length
hg38154975
hg19154975
hg18154975
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv26e203
Supporting Variantsessv7020810, essv7020816, essv7020803, essv7020799, essv7020809, essv7020798, essv7020807, essv7020808, essv7020815, essv7020805, essv7020813, essv7020806, essv7020797, essv7020814, essv7020812, essv7020802, essv7020801, essv7020804
SamplesRW_0075, RW_0006, RW_0134, RW_0168, RW_0205, RW_0255, RW_0551, RW_0017, RW_0539, RW_0103, RW_0321, RW_0593, RW_0129, RW_0328, RW_0126, RW_0632, RW_0550, RW_0139
Known GenesDDX11
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)esv2760232
Frequency
Sample Size1109
Observed Gain18
Observed Loss0
Observed Complex0
Frequencyn/a


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