A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2760105



Internal ID10376413
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:65538843..65576730hg38UCSC Ensembl
Innerchr10:67298601..67336488hg19UCSC Ensembl
Innerchr10:66968607..67006494hg18UCSC Ensembl
Cytoband10q21.3
Allele length
AssemblyAllele length
hg3837888
hg1937888
hg1837888
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv7018737, essv7018743, essv7018746, essv7018739, essv7018751, essv7018741, essv7018748, essv7018740, essv7018738, essv7018749, essv7018750, essv7018747, essv7018742
SamplesRW_0604, RW_0330, RW_0570, RW_0541, RW_0325, RW_0194, RW_0068, RW_0523, RW_0521, RW_0543, RW_0031, RW_0550, RW_0034
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)esv2760105
Frequency
Sample Size1109
Observed Gain0
Observed Loss13
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer