Variant Details

Variant: esv2760037

Internal ID

9635496

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr15:69342413..69499860	hg38	UCSC Ensembl
Inner	chr15:69634752..69792199	hg19	UCSC Ensembl
Inner	chr15:67421806..67579253	hg18	UCSC Ensembl
Inner	chr15:67421806..67579253	hg17	UCSC Ensembl

Cytoband

15q23

Allele length

Assembly	Allele length
hg38	157448
hg19	157448
hg18	157448
hg17	157448

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

esv2758385

Samples

NA18545, NA10857, NA18633, NA19192, NA10846, NA18558, NA18571, NA18970, NA19209, NA18975, NA11993, NA12753, NA10863, NA19205, NA12234, NA19221, NA18537, NA18566, NA10830, NA12239, NA18853, NA18570, NA18858, NA18945, NA18961, NA07348, NA19173, NA18636, NA18609, NA18854, NA18612

Known Genes

KIF23, PAQR5, RPLP1

Method

BAC aCGH

Analysis

Array images were acquired using an Agilent laser scanner (Agilent Technologies, UK). Fluorescence intensities and log2 ratio values were extracted using Bluefuse software (Bluegnome Ltd).

Platform

Agilent

Comments

Reference

Redon_et_al_2006

Pubmed ID

17122850

Accession Number(s)

esv2760037

Frequency

Sample Size	270
Observed Gain	0
Observed Loss	31
Observed Complex	0
Frequency	n/a