Variant Details

Variant: esv2758802

Internal ID

9634261

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr20:57595722..58113215	hg38	UCSC Ensembl
Inner	chr20:56170778..56688271	hg19	UCSC Ensembl
Inner	chr20:55604184..56121677	hg18	UCSC Ensembl
Inner	chr20:55604184..56121677	hg17	UCSC Ensembl

Cytoband

20q13.31

Allele length

Assembly	Allele length
hg38	517494
hg19	517494
hg18	517494
hg17	517494

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

esv2758523

Samples

NA19222, NA18862, NA18861, NA18545, NA12248, NA19098, NA18633, NA12155, NA18563, NA18558, NA18970, NA19137, NA18975, NA11993, NA10847, NA12753, NA19161, NA18637, NA18871, NA18976, NA12234, NA18537, NA18573, NA10830, NA18912, NA18555, NA19160, NA18570, NA18858, NA18945, NA18863, NA18501, NA18636, NA18500, NA18609, NA12006

Known Genes

MIR4532, PMEPA1, ZBP1

Method

BAC aCGH

Analysis

Array images were acquired using an Agilent laser scanner (Agilent Technologies, UK). Fluorescence intensities and log2 ratio values were extracted using Bluefuse software (Bluegnome Ltd).

Platform

Agilent

Comments

Reference

Redon_et_al_2006

Pubmed ID

17122850

Accession Number(s)

esv2758802

Frequency

Sample Size	270
Observed Gain	0
Observed Loss	36
Observed Complex	0
Frequency	n/a