Variant Details

Variant: esv2758509

Internal ID

9633968

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr20:1496135..1698610	hg38	UCSC Ensembl
Inner	chr20:1476781..1679256	hg19	UCSC Ensembl
Inner	chr20:1424781..1627256	hg18	UCSC Ensembl
Inner	chr20:1424781..1627256	hg17	UCSC Ensembl

Cytoband

20p13

Allele length

Assembly	Allele length
hg38	202476
hg19	202476
hg18	202476
hg17	202476

Variant Type

CNV gain+loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

esv2758777

Supporting Variants

essv24709, essv9908, essv9659, essv10588, essv21112, essv11514, essv17958, essv13670, essv17205, essv9220, essv22975, essv22207, essv16534, essv16033, essv11111, essv8146, essv15334, essv15258, essv4223, essv6147, essv20269, essv15058, essv22312, essv15648, essv8210, essv16956, essv11665, essv8863, essv16912, essv4811, essv15570, essv14289, essv20380, essv16095, essv14595, essv1170, essv14571, essv23194, essv15900, essv2101, essv10033, essv12857, essv6769, essv17830, essv128, essv10145, essv6623, essv21188, essv18665, essv19395, essv21865, essv1364, essv7173, essv294, essv3034, essv18375, essv19509, essv10428, essv10640, essv6703, essv12182, essv1603, essv13457, essv17560, essv10769, essv16663, essv17329, essv24241, essv11249, essv13636, essv19915, essv2893, essv20035, essv13016, essv21001, essv12531, essv19264, essv2597

Samples

NA19222, NA11830, NA18621, NA11829, NA19204, NA18862, NA18508, NA18855, NA19145, NA18603, NA19098, NA07357, NA12813, NA19127, NA19192, NA19171, NA19119, NA18547, NA18942, NA07048, NA12762, NA19130, NA18949, NA12156, NA19137, NA12044, NA19128, NA12815, NA18990, NA19007, NA18951, NA19210, NA19120, NA19194, NA12003, NA10831, NA18859, NA19205, NA11839, NA10838, NA18981, NA12234, NA19202, NA19142, NA11840, NA10830, NA18856, NA12249, NA18912, NA19154, NA18532, NA19099, NA19101, NA12144, NA06985, NA18523, NA10856, NA18608, NA18953, NA19094, NA18978, NA19206, NA06991, NA12864, NA18913, NA19240, NA19100, NA19144, NA18501, NA19223, NA19173, NA19211, NA19093, NA19116, NA19129, NA18968, NA18562, NA18620

Known Genes

SIRPB1, SIRPD, SIRPG

Method

BAC aCGH

Analysis

Array images were acquired using an Agilent laser scanner (Agilent Technologies, UK). Fluorescence intensities and log2 ratio values were extracted using Bluefuse software (Bluegnome Ltd).

Platform

Agilent

Comments

Reference

Redon_et_al_2006

Pubmed ID

17122850

Accession Number(s)

esv2758509

Frequency

Sample Size	270
Observed Gain	3
Observed Loss	75
Observed Complex	0
Frequency	n/a