Variant Details

Variant: esv2758252

Internal ID

9633711

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr11:3215282..3780199	hg38	UCSC Ensembl
Inner	chr11:3236512..3801429	hg19	UCSC Ensembl
Inner	chr11:3193088..3758005	hg18	UCSC Ensembl
Inner	chr11:3193088..3758005	hg17	UCSC Ensembl

Cytoband

11p15.4

Allele length

Assembly	Allele length
hg38	564918
hg19	564918
hg18	564918
hg17	564918

Variant Type

CNV gain+loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

esv2759796

Supporting Variants

essv10006, essv2193, essv11182, essv17300, essv11023, essv17297, essv12340, essv7019, essv20325, essv10785, essv11657, essv1219, essv14796, essv21528, essv6160, essv11588, essv10166, essv12859, essv11265, essv17093, essv4949, essv9056, essv20916, essv24889, essv16413, essv10265, essv1143, essv22835, essv17085, essv7078, essv19275, essv6615, essv17671, essv1958, essv20407, essv15451, essv10863, essv13654, essv8089, essv11246, essv16909, essv6651, essv5043, essv13894, essv9450, essv3039, essv12839, essv9711, essv24042, essv11751, essv22448, essv21167, essv20645, essv15583, essv22065, essv15994, essv9898, essv7832, essv16486, essv12690, essv12702, essv22645, essv10378, essv13746, essv11847, essv18108, essv13735, essv2992, essv22035, essv5313, essv15516, essv15237, essv21043, essv16283, essv14170, essv6749, essv23535, essv14275, essv3420, essv3227, essv1729, essv5211, essv19234, essv15326, essv3086, essv4709, essv6280, essv16880, essv12188, essv15769, essv14868, essv839, essv23876, essv2005, essv23455, essv24259, essv5738, essv16786

Samples

NA19222, NA11830, NA18621, NA19204, NA18862, NA12814, NA12236, NA19145, NA12004, NA12801, NA18504, NA18959, NA18969, NA18563, NA19127, NA18995, NA10854, NA19119, NA18558, NA19131, NA18960, NA19138, NA18964, NA06993, NA19130, NA18949, NA18611, NA12761, NA19137, NA19172, NA19159, NA18973, NA11993, NA19210, NA12752, NA19120, NA19194, NA19161, NA19205, NA18637, NA18871, NA10838, NA18981, NA19208, NA19221, NA18537, NA10830, NA18856, NA12892, NA19154, NA18532, NA19099, NA19101, NA18523, NA19132, NA10856, NA18593, NA18945, NA18974, NA18576, NA18608, NA19094, NA18914, NA19206, NA06991, NA11881, NA10859, NA19140, NA18913, NA12873, NA19143, NA18501, NA19173, NA19211, NA18636, NA18500, NA18506, NA18854, NA18872, NA18505, NA19139, NA07000, NA18522, NA12154, NA18612, NA18622, NA19153, NA18562, NA18997

Known Genes

ART1, ART5, CHRNA10, LOC650368, MRGPRE, MRGPRG, MRGPRG-AS1, NUP98, OR7E12P, TRPC2, ZNF195

Method

BAC aCGH

Analysis

Array images were acquired using an Agilent laser scanner (Agilent Technologies, UK). Fluorescence intensities and log2 ratio values were extracted using Bluefuse software (Bluegnome Ltd).

Platform

Agilent

Comments

Reference

Redon_et_al_2006

Pubmed ID

17122850

Accession Number(s)

esv2758252

Frequency

Sample Size	270
Observed Gain	26
Observed Loss	72
Observed Complex	0
Frequency	n/a