Variant Details

Variant: esv2758025

Internal ID

9980102

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr5:161117736..161267212	hg38	UCSC Ensembl
Inner	chr5:160544743..160694219	hg19	UCSC Ensembl
Inner	chr5:160477321..160626797	hg18	UCSC Ensembl
Inner	chr5:160477321..160626797	hg17	UCSC Ensembl

Cytoband

5q34

Allele length

Assembly	Allele length
hg38	149477
hg19	149477
hg18	149477
hg17	149477

Variant Type

CNV gain+loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

esv2759390

Supporting Variants

essv23914, essv15767, essv9931, essv893, essv2600, essv3366, essv16925, essv24270, essv16701, essv7026, essv24697, essv4053, essv3011, essv2473, essv5197, essv18969, essv3757, essv19278, essv9071, essv4900, essv5903, essv9731, essv1010, essv6257, essv14543, essv4824, essv20016, essv2798, essv17089, essv16738, essv20773, essv2009, essv12396

Samples

NA11829, NA12814, NA18561, NA19145, NA18999, NA12146, NA19005, NA18550, NA18635, NA19131, NA07048, NA18949, NA18611, NA12005, NA19238, NA19172, NA18990, NA10838, NA18981, NA19202, NA19142, NA19000, NA19132, NA10856, NA18945, NA18961, NA18540, NA18913, NA19144, NA18987, NA18636, NA18872, NA18612

Known Genes

Method

BAC aCGH

Analysis

Array images were acquired using an Agilent laser scanner (Agilent Technologies, UK). Fluorescence intensities and log2 ratio values were extracted using Bluefuse software (Bluegnome Ltd).

Platform

Agilent

Comments

Reference

Redon_et_al_2006

Pubmed ID

17122850

Accession Number(s)

esv2758025

Frequency

Sample Size	270
Observed Gain	14
Observed Loss	19
Observed Complex	0
Frequency	n/a