Variant Details

Variant: esv2758002

Internal ID

9633461

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr5:94429500..94706496	hg38	UCSC Ensembl
Inner	chr5:93765205..94042201	hg19	UCSC Ensembl
Inner	chr5:93790961..94067957	hg18	UCSC Ensembl
Inner	chr5:93790961..94067957	hg17	UCSC Ensembl

Cytoband

5q15

Allele length

Assembly	Allele length
hg38	276997
hg19	276997
hg18	276997
hg17	276997

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

esv2759354

Supporting Variants

essv21149, essv22183, essv24157, essv11884, essv23207, essv2210, essv3079, essv16937, essv13548, essv4246, essv4174, essv16705, essv6241, essv16120, essv9778, essv8319, essv3777, essv9358, essv15126, essv23377, essv21387, essv5030, essv16913, essv19783, essv18582, essv3065, essv23241, essv20203, essv10306, essv471, essv3526, essv15560, essv10679, essv127, essv1473, essv3296, essv4025, essv24834, essv9704, essv2844, essv22899, essv2332, essv24526, essv21802, essv19558, essv6354, essv17168, essv3973, essv9408, essv8845, essv12508, essv800, essv7549, essv6120, essv4970, essv11190, essv14149, essv11535, essv1828, essv16527, essv24484, essv88, essv19902, essv1271, essv18976, essv14535, essv4373, essv658, essv12556, essv11046, essv18201, essv12658, essv20394, essv5408, essv19249, essv14087, essv7130, essv14769, essv13839, essv15245, essv21190, essv11835, essv14305, essv16227, essv9189, essv13629, essv6811, essv23822, essv4739, essv375, essv15536, essv23078, essv24792, essv8330, essv12324, essv20229, essv7324, essv7421, essv17819, essv14379, essv15693, essv18359, essv6727, essv4633, essv22350, essv11699, essv6641, essv4820, essv19426, essv21536, essv19607, essv6032, essv4451, essv18277, essv2465, essv23663, essv22174, essv23574, essv2663, essv3398, essv2287, essv222, essv15898, essv7724, essv16451, essv23958, essv20577, essv17583, essv20944, essv13067, essv6985, essv18105, essv9870, essv17971, essv13017, essv20014, essv21996, essv10902, essv7790

Samples

NA11830, NA18621, NA11995, NA18861, NA18508, NA12814, NA18855, NA18507, NA19145, NA18999, NA18603, NA18545, NA07029, NA12801, NA10857, NA19098, NA18633, NA12750, NA12155, NA18969, NA12813, NA18967, NA18563, NA19127, NA19171, NA18944, NA18940, NA12812, NA10835, NA10846, NA18995, NA12802, NA18635, NA18558, NA18960, NA07048, NA18571, NA12762, NA19138, NA12005, NA18970, NA12156, NA19137, NA12044, NA11994, NA19207, NA19128, NA18966, NA12815, NA19159, NA19209, NA18975, NA11993, NA10847, NA19210, NA12760, NA19194, NA12003, NA10863, NA10831, NA19161, NA18956, NA18859, NA19205, NA18991, NA18637, NA18579, NA19103, NA18976, NA18948, NA10838, NA18981, NA12234, NA19208, NA19221, NA19202, NA18537, NA18573, NA19142, NA11840, NA10830, NA12056, NA18912, NA19154, NA18532, NA12239, NA18853, NA18555, NA12144, NA06985, NA19160, NA18570, NA18858, NA18945, NA18576, NA18608, NA18953, NA19094, NA18961, NA18952, NA12864, NA18863, NA18540, NA12057, NA19140, NA18913, NA19100, NA12873, NA19144, NA12763, NA18594, NA19143, NA12740, NA18971, NA19223, NA19173, NA19211, NA10860, NA18636, NA18521, NA18500, NA18609, NA18506, NA18854, NA18972, NA18552, NA18852, NA07056, NA18505, NA19129, NA18968, NA19139, NA12006, NA18623, NA07000, NA18612, NA18965, NA11832, NA18620

Known Genes

ANKRD32, KIAA0825

Method

BAC aCGH

Analysis

Array images were acquired using an Agilent laser scanner (Agilent Technologies, UK). Fluorescence intensities and log2 ratio values were extracted using Bluefuse software (Bluegnome Ltd).

Platform

Agilent

Comments

Reference

Redon_et_al_2006

Pubmed ID

17122850

Accession Number(s)

esv2758002

Frequency

Sample Size	270
Observed Gain	0
Observed Loss	139
Observed Complex	0
Frequency	n/a