A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2750455



Internal ID9984739
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:6068764..6960471hg38UCSC Ensembl
Outerchr16:6118765..7010472hg19UCSC Ensembl
Cytoband16p13.3
Allele length
AssemblyAllele length
hg38891708
hg19891708
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6913059, essv6741492, essv6724937, essv6846317, essv6828182, essv6768861, essv6768862, essv6966562, essv6792334, essv6721146, essv6688662, essv6851963, essv6758550, essv6905354, essv6752906, essv6806737, essv6942873, essv6702935, essv6800719, essv6696070, essv6696069, essv6846318, essv6838142, essv6706625, essv6928315, essv6846316, essv6806738, essv6673939, essv6920714, essv6966563, essv6776422, essv6673938, essv6713403, essv6741864, essv6696067, essv6839094, essv6960093, essv6699065, essv6768860, essv6706624, essv6924829, essv6862971, essv6877040, essv6900980, essv6792335, essv6945488, essv6815851, essv6696068, essv6877039, essv6682001
SamplesSSM100, SSM059, SSM008, SSM083, SSM027, SSM045, SSM064, SSM038, SSM039, SSM013, SSM074, SSM042, SSM088, SSM057, SSM023, SSM092, SSM018, SSM026, SSM017, SSM019, SSM035, SSM003, SSM031, SSM044, SSM086, SSM033, SSM085, SSM040, SSM072, SSM007, SSM015, SSM080, SSM037, SSM077, SSM010, SSM070, SSM052
Known GenesRBFOX1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2750455
Frequency
Sample Size96
Observed Gain0
Observed Loss37
Observed Complex0
Frequencyn/a


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