A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2750262



Internal ID10331232
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:929704..930358hg38UCSC Ensembl
Outerchr16:979704..980358hg19UCSC Ensembl
Cytoband16p13.3
Allele length
AssemblyAllele length
hg38655
hg19655
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6792322, essv6824083, essv6901750, essv6828168, essv6779915, essv6673922, essv6975062, essv6728741, essv6696055, essv6835304, essv6776129, essv6772540, essv6949567, essv6839072, essv6815842, essv6842913, essv6665428, essv6942795, essv6702917, essv6796485, essv6761311, essv6895058, essv6809844, essv6788231, essv6960061, essv6831763
SamplesSSM083, SSM071, SSM024, SSM046, SSM079, SSM065, SSM039, SSM009, SSM084, SSM069, SSM061, SSM029, SSM026, SSM003, SSM031, SSM067, SSM066, SSM081, SSM082, SSM080, SSM037, SSM077, SSM070, SSM004, SSM098, SSM012
Known GenesLMF1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2750262
Frequency
Sample Size96
Observed Gain0
Observed Loss26
Observed Complex0
Frequencyn/a


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