A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2750017



Internal ID10330987
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:90858775..90859181hg38UCSC Ensembl
Outerchr15:91402005..91402411hg19UCSC Ensembl
Cytoband15q26.1
Allele length
AssemblyAllele length
hg38407
hg19407
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6755907, essv6761294, essv6717232, essv6891648, essv6763663, essv6688639, essv6706595, essv6913019, essv6945453, essv6724905, essv6974906, essv6812542, essv6971289, essv6702894, essv6885368, essv6877014, essv6874007, essv6665379, essv6831745, essv6820230, essv6846288, essv6901734, essv6721116, essv6681976, essv6909308, essv6691965, essv6668439, essv6809731
SamplesSSM036, SSM075, SSM045, SSM097, SSM039, SSM023, SSM058, SSM028, SSM092, SSM061, SSM029, SSM062, SSM035, SSM044, SSM014, SSM033, SSM085, SSM081, SSM040, SSM015, SSM078, SSM076, SSM091, SSM095, SSM004, SSM043, SSM030, SSM012
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2750017
Frequency
Sample Size96
Observed Gain0
Observed Loss28
Observed Complex0
Frequencyn/a


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